RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
PTPRVP-204ENST00000639439 KIFC2Q96AC6 838 aa18.43■□□□□ 0.54
PTPRVP-204ENST00000639439 GMCL1Q96IK5 515 aa18.43■□□□□ 0.54
PTPRVP-204ENST00000639439 ZMYM6O95789 1325 aa18.43■□□□□ 0.54
PTPRVP-204ENST00000639439 ORC4O43929 436 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 OAZ1P54368 228 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 PLEKHM2Q8IWE5 1019 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 ARRDC4Q8NCT1 418 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 SLC38A10Q9HBR0 1119 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 PCDH10Q9P2E7 1040 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 MYH4Q9Y623 1939 aa18.42■□□□□ 0.54
PTPRVP-204ENST00000639439 A0A1W2PPC1 479 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 DNM1LO00429 736 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 FGAP02671 866 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 FGRP09769 529 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 HSPD1P10809 573 aaKnown RBP18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 SLC1A4P43007 532 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 ZNF792Q3KQV3 632 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 FAM160B2Q86V87 743 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 MSL3Q8N5Y2 521 aaKnown RBP18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 TINF2Q9BSI4 451 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 FBXO40Q9UH90 709 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 COL11A1P12107 1806 aaPredicted RBP18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
PTPRVP-204ENST00000639439 PGK2P07205 417 aa18.4■□□□□ 0.54
PTPRVP-204ENST00000639439 STAT2P52630 851 aa18.4■□□□□ 0.54
PTPRVP-204ENST00000639439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTPRVP-204ENST00000639439 CPXCR1Q8N123 301 aa18.4■□□□□ 0.54
PTPRVP-204ENST00000639439 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
PTPRVP-204ENST00000639439 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
PTPRVP-204ENST00000639439 RANBP2P49792 3224 aaKnown RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 HIP1O00291 1037 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 PLA2G6O60733 806 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 PCP11498 1178 aaKnown RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 SDSP20132 328 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 NOVP48745 357 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 CHST13Q8NET6 341 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 STAG1Q8WVM7 1258 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 SENP6Q9GZR1 1112 aaPredicted RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 RAVER2Q9HCJ3 691 aaKnown RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 INCENPQ9NQS7 918 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 IL17RBQ9NRM6 502 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 TOMM22Q9NS69 142 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 ZMYND8Q9ULU4 1186 aaPredicted RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 RIPK3Q9Y572 518 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 ALPK3Q96L96 1907 aa18.39■□□□□ 0.53
PTPRVP-204ENST00000639439 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 MCCP23508 829 aa18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 PRAMEF19Q5SWL8 479 aa18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 RCSD1Q6JBY9 416 aa18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 CNPY2Q9Y2B0 182 aa18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 ZNFX1Q9P2E3 1918 aaKnown RBP18.38■□□□□ 0.53
PTPRVP-204ENST00000639439 FRMPD3Q5JV73 1810 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 BMP8BP34820 402 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 NT5C2P49902 561 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 GDF15Q99988 308 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 RNF41Q9H4P4 317 aaPredicted RBP18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 DIAPH3Q9NSV4 1193 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 TACC3Q9Y6A5 838 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
PTPRVP-204ENST00000639439 NMT2O60551 498 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 RARBP10826 455 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 RRP12Q5JTH9 1297 aaKnown RBP18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 GJC2Q5T442 439 aaPredicted RBP18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 MAMDC4Q6UXC1 1216 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 DCAF4Q8WV16 495 aa18.36■□□□□ 0.53
PTPRVP-204ENST00000639439 TOP1P11387 765 aaKnown RBP18.35■□□□□ 0.53
PTPRVP-204ENST00000639439 AKR1A1P14550 325 aa18.35■□□□□ 0.53
PTPRVP-204ENST00000639439 AKNAD1Q5T1N1 836 aa18.35■□□□□ 0.53
PTPRVP-204ENST00000639439 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
PTPRVP-204ENST00000639439 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
PTPRVP-204ENST00000639439 ZNF865P0CJ78 1059 aaPredicted RBP18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 SYN1P17600 705 aa18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 HAND2P61296 217 aa18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 LRRC41Q15345 812 aa18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 KCTD1Q719H9 257 aa18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 TTC14Q96N46 770 aa18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 XPNPEP3Q9NQH7 507 aa18.34■□□□□ 0.53
PTPRVP-204ENST00000639439 PLXNA1Q9UIW2 1896 aa18.33■□□□□ 0.53
PTPRVP-204ENST00000639439 ZNF213O14771 459 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms