RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HAUS4Q9H6D7 363 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 CICQ96RK0 1608 aaPredicted RBP12.28□□□□□ -0.44
SNIP1-204ENST00000638725 RNF40O75150 1001 aa12.27□□□□□ -0.44
SNIP1-204ENST00000638725 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.44
SNIP1-204ENST00000638725 CCDC122Q5T0U0 273 aa12.27□□□□□ -0.44
SNIP1-204ENST00000638725 WDR59Q6PJI9 974 aa12.27□□□□□ -0.44
SNIP1-204ENST00000638725 ACBD3Q9H3P7 528 aa12.27□□□□□ -0.44
SNIP1-204ENST00000638725 RMND1Q9NWS8 449 aa12.27□□□□□ -0.44
SNIP1-204ENST00000638725 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.44
SNIP1-204ENST00000638725 ITGB4P16144 1822 aa12.27□□□□□ -0.44
SNIP1-204ENST00000638725 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.45
SNIP1-204ENST00000638725 LGALS16A8MUM7 142 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 H7C1D1 291 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 RPS6KA5O75582 802 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 DDAH1O94760 285 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 CALM1P0DP23 149 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 CALM2P0DP24 149 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 CALM3P0DP25 149 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 GYG1P46976 350 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 LRRC31Q6UY01 552 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 GDAP1L1Q96MZ0 367 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 DNAJC7Q99615 494 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 MED4Q9NPJ6 270 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 RSPH14Q9UHP6 348 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 SAR1BQ9Y6B6 198 aa12.27□□□□□ -0.45
SNIP1-204ENST00000638725 ZMYND10O75800 440 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 SYF2O95926 243 aaKnown RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 SCG2P13521 617 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 IL6STP40189 918 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 STAT6P42226 847 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 ADSSL1Q8N142 457 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 PYM1Q9BRP8 204 aaKnown RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 FAM47AQ5JRC9 791 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 ZNF507Q8TCN5 953 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 RIN2Q8WYP3 895 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 PLEKHA4Q9H4M7 779 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 GNL3LQ9NVN8 582 aaKnown RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 HPCAL4Q9UM19 191 aa12.26□□□□□ -0.45
SNIP1-204ENST00000638725 COL1A1P02452 1464 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-204ENST00000638725 BCL9O00512 1426 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 PP2D1A8MPX8 630 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 TRAPPC10P48553 1259 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 CCDC152Q4G0S7 254 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 CTR9Q6PD62 1173 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 KIAA1328Q86T90 577 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 EEF2KMTQ96G04 330 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 CAPN11Q9UMQ6 739 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 PDS5AQ29RF7 1337 aaKnown RBP12.25□□□□□ -0.45
SNIP1-204ENST00000638725 FAM205AQ6ZU69 1335 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 USP17L12C9JPN9 530 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 USP17L21D6R901 530 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 NAALADL2Q58DX5 795 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 PAPD7Q5XG87 772 aaKnown RBP12.25□□□□□ -0.45
SNIP1-204ENST00000638725 C4orf32Q8N8J7 132 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 TRIM47Q96LD4 638 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 PLIN2Q99541 437 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 LACRTQ9GZZ8 138 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 VIPAS39Q9H9C1 493 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 DISC1Q9NRI5 854 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 AGPAT5Q9NUQ2 364 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 COL4A1P02462 1669 aa12.25□□□□□ -0.45
SNIP1-204ENST00000638725 ZC3H4Q9UPT8 1303 aaKnown RBP12.25□□□□□ -0.45
SNIP1-204ENST00000638725 A0A1W2PQC6 194 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 B4DLN1 442 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 ZNF185O15231 689 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 PRPF6O94906 941 aaKnown RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 MYBL2P10244 700 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 LONP1P36776 959 aaKnown RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 AARSP49588 968 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 PFKFB3Q16875 520 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 TSR1Q2NL82 804 aaKnown RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 RASSF8Q8NHQ8 419 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 AFAP1L1Q8TED9 768 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 ZNF384Q8TF68 577 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 ANKRD65E5RJM6 399 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 KLK7P49862 253 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 MAP9Q49MG5 647 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 CACNA1SQ13698 1873 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 PDE2AO00408 941 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 KLRC4O43908 158 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 FGRP09769 529 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 EEF1GP26641 437 aaKnown RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 ARL6IP4Q66PJ3 421 aaKnown RBP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 GOLGA6L1Q8N7Z2 621 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 CAGE1Q8TC20 777 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 COG1Q8WTW3 980 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNIP1-204ENST00000638725 DUSP10Q9Y6W6 482 aa12.24□□□□□ -0.45
SNIP1-204ENST00000638725 DLEC1Q9Y238 1755 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 ZNF804BA4D1E1 1349 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 KRT86O43790 486 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 EIF5P55010 431 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms