RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 PCDHA4Q9UN74 947 aa11.86□□□□□ -0.51
LINC00598-216ENST00000638163 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 CYTH3O43739 400 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 NAPAP54920 295 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 UBE2HP62256 183 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 PPATQ06203 517 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 EAPPQ56P03 285 aaPredicted RBP11.85□□□□□ -0.51
LINC00598-216ENST00000638163 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 KRT25Q7Z3Z0 450 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 ERO1BQ86YB8 467 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 PRPF38AQ8NAV1 312 aaKnown RBP11.85□□□□□ -0.51
LINC00598-216ENST00000638163 CDCA5Q96FF9 252 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 AMNQ9BXJ7 453 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
LINC00598-216ENST00000638163 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
LINC00598-216ENST00000638163 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 A0A1W2PRG0 241 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 TMEM232C9JQI7 657 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 STXBP3O00186 592 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 CXCL11O14625 94 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 RAD21O60216 631 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 USP2O75604 605 aaPredicted RBP11.84□□□□□ -0.51
LINC00598-216ENST00000638163 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 NASPP49321 788 aaPredicted RBP11.84□□□□□ -0.51
LINC00598-216ENST00000638163 OAZ1P54368 228 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00598-216ENST00000638163 RRP1BQ14684 758 aaKnown RBP11.84□□□□□ -0.51
LINC00598-216ENST00000638163 KLHL40Q2TBA0 621 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 CLEC10AQ8IUN9 316 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 BLIDQ8IZY5 108 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 CUL5Q93034 780 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
LINC00598-216ENST00000638163 VPS54Q9P1Q0 977 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
LINC00598-216ENST00000638163 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
LINC00598-216ENST00000638163 PAPPA2Q9BXP8 1791 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 CCDC194A0A1B0GVG4 234 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 LAD1O00515 517 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 PPP6R2O75170 966 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
LINC00598-216ENST00000638163 INPP5BP32019 993 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 ADCY7P51828 1080 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
LINC00598-216ENST00000638163 AP3B2Q13367 1082 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 CDC37Q16543 378 aaPredicted RBP11.83□□□□□ -0.52
LINC00598-216ENST00000638163 WWC2Q6AWC2 1192 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 KCTD1Q719H9 257 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 HOMER1Q86YM7 354 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 REXO1Q8N1G1 1221 aaKnown RBP11.83□□□□□ -0.52
LINC00598-216ENST00000638163 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
LINC00598-216ENST00000638163 PROCA1Q8NCQ7 364 aaPredicted RBP11.83□□□□□ -0.52
LINC00598-216ENST00000638163 PIGSQ96S52 555 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 RIC8AQ9NPQ8 531 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 RABGAP1Q9Y3P9 1069 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 ABCB11O95342 1321 aa11.83□□□□□ -0.52
LINC00598-216ENST00000638163 SMCO2A6NFE2 343 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 BTBD18B2RXH4 712 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 ADM5C9JUS6 153 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 ECE1P42892 770 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 JAG1P78504 1218 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 PPIL2Q13356 520 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 VGLL4Q14135 290 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 ANO1Q5XXA6 986 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 MB21D1Q8N884 522 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 ACER1Q8TDN7 264 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 GTF3C2Q8WUA4 911 aaPredicted RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 AIFM3Q96NN9 605 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
LINC00598-216ENST00000638163 ZHX2Q9Y6X8 837 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 MYH6P13533 1939 aa11.82□□□□□ -0.52
LINC00598-216ENST00000638163 TRIM75PA6NK02 468 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L15C9J2P7 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L13C9JLJ4 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L11C9JVI0 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L18D6R9N7 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L22D6RA61 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L17D6RBQ6 530 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms