RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 PRPF38AQ8NAV1 312 aaKnown RBP14.72□□□□□ -0.05
CLN6-225ENST00000638144 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 TRIB2Q92519 343 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 NUDT12Q9BQG2 462 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 UBAC1Q9BSL1 405 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 CNNM2Q9H8M5 875 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 SENP2Q9HC62 589 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 RAVER2Q9HCJ3 691 aaKnown RBP14.72□□□□□ -0.05
CLN6-225ENST00000638144 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 IVNS1ABPQ9Y6Y0 642 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 ZNF236Q9UL36 1845 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 SLC27A2O14975 620 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 PTPREP23469 700 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 STAT3P40763 770 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 TRDNQ13061 729 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 IRF5Q13568 498 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 CREB3L3Q68CJ9 461 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 CCDC174Q6PII3 467 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 RALYLQ86SE5 291 aaKnown RBP14.71□□□□□ -0.05
CLN6-225ENST00000638144 NBPF11Q86T75 865 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 PNMA1Q8ND90 353 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 DCAF4Q8WV16 495 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 SOCS4Q8WXH5 440 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 UNC93B1Q9H1C4 597 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 CPVLQ9H3G5 476 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 HOMER2Q9NSB8 354 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 RIPK3Q9Y572 518 aa14.71□□□□□ -0.05
CLN6-225ENST00000638144 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
CLN6-225ENST00000638144 TNRC18O15417 2968 aaPredicted RBP14.71□□□□□ -0.05
CLN6-225ENST00000638144 PDHBP11177 359 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 ADORA2AP29274 412 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 RGS2P41220 211 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 ANTXR2P58335 489 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 MAP2K5Q13163 448 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 GRB14Q14449 540 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 RIOX2Q8IUF8 465 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 SHCBP1Q8NEM2 672 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 USP6NLQ92738 828 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 APBA2Q99767 749 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 KAT14Q9H8E8 782 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 SLC38A10Q9HBR0 1119 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 GPHNQ9NQX3 736 aaPredicted RBP14.7□□□□□ -0.06
CLN6-225ENST00000638144 PRR12Q9ULL5 1215 aa14.7□□□□□ -0.06
CLN6-225ENST00000638144 PLXNA1Q9UIW2 1896 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 SLC15A5A6NIM6 579 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 ZBED4O75132 1171 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 PGK2P07205 417 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 CCL5P13501 91 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 NECTIN1Q15223 517 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 SEC23AQ15436 765 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 FAM160B2Q86V87 743 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 MB21D2Q8IYB1 491 aaPredicted RBP14.69□□□□□ -0.06
CLN6-225ENST00000638144 NCOA7Q8NI08 942 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 NPLOC4Q8TAT6 608 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 CHURC1Q8WUH1 139 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 AGBL1Q96MI9 1066 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 TTC14Q96N46 770 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 TEX13BQ9BXU2 312 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 FLRT1Q9NZU1 646 aa14.69□□□□□ -0.06
CLN6-225ENST00000638144 MKI67P46013 3256 aaKnown RBP14.68□□□□□ -0.06
CLN6-225ENST00000638144 IFIT3O14879 490 aaKnown RBP14.68□□□□□ -0.06
CLN6-225ENST00000638144 COBLO75128 1261 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 HMGCRP04035 888 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
CLN6-225ENST00000638144 EN2P19622 333 aaPredicted RBP14.68□□□□□ -0.06
CLN6-225ENST00000638144 UBXN2AP68543 259 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 ZNF543Q08ER8 600 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 IFIT1BQ5T764 474 aaKnown RBP14.68□□□□□ -0.06
CLN6-225ENST00000638144 SYDE2Q5VT97 1194 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 PXYLP1Q8TE99 480 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 RNF208Q9H0X6 261 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 MROH8Q9H579 483 aa14.68□□□□□ -0.06
CLN6-225ENST00000638144 ZNF536O15090 1300 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 BAZ2BQ9UIF8 2168 aaKnown RBP14.67□□□□□ -0.06
CLN6-225ENST00000638144 SLC25A27O95847 323 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 SNHG28P0DPA3 235 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
CLN6-225ENST00000638144 CCDC178Q5BJE1 867 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 DPP9Q86TI2 863 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 RASEFQ8IZ41 740 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 ANKS1AQ92625 1134 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 MMP19Q99542 508 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 LRRC2Q9BYS8 371 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 UBA5Q9GZZ9 404 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 PDE4DIPQ5VU43 2346 aa14.67□□□□□ -0.06
CLN6-225ENST00000638144 MYH6P13533 1939 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 MCM3APO60318 1980 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 PRC1O43663 620 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 FCER1AP12319 257 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 ALAS1P13196 640 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 CYP2C19P33261 490 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 TMEM67Q5HYA8 995 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 TCEANC2Q96MN5 208 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 MYL10Q9BUA6 226 aa14.66□□□□□ -0.06
CLN6-225ENST00000638144 STRNO43815 780 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 PLA2G6O60733 806 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
CLN6-225ENST00000638144 CCND3P30281 292 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms