RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 MCCP23508 829 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 CNGA1P29973 690 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 MAP3K21Q5TCX8 1036 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 FAM160B2Q86V87 743 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 CPXCR1Q8N123 301 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 DPF3Q92784 378 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 GMCL1Q96IK5 515 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 ZNF236Q9UL36 1845 aa17.58■□□□□ 0.4
PPFIA1-225ENST00000638133 RAD50Q92878 1312 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 PDE4DIPQ5VU43 2346 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 FDX1P10109 184 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 CCDC96Q2M329 555 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 ANKLE1Q8NAG6 615 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 NPLOC4Q8TAT6 608 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 CRISPLD2Q9H0B8 497 aa17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 ZNF214Q9UL59 606 aaPredicted RBP17.57■□□□□ 0.4
PPFIA1-225ENST00000638133 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 CCND3P30281 292 aaPredicted RBP17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 NT5C2P49902 561 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 KCTD1Q719H9 257 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 IQCA1Q86XH1 822 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 TBC1D10CQ8IV04 446 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 REPS2Q8NFH8 660 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 TCP11L1Q9NUJ3 509 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 FLRT1Q9NZU1 646 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
PPFIA1-225ENST00000638133 CYP2C19P33261 490 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 CCDC178Q5BJE1 867 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 OLFML2BQ68BL8 750 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 CENPQQ7L2Z9 268 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 NECAB2Q7Z6G3 386 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 DDX11Q96FC9 970 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 TTC14Q96N46 770 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 SLC38A10Q9HBR0 1119 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 RAVER2Q9HCJ3 691 aaKnown RBP17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 LAMA4Q16363 1823 aa17.55■□□□□ 0.4
PPFIA1-225ENST00000638133 NEDD4P46934 1319 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 MSCO60682 206 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 COBLO75128 1261 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 OAZ1P54368 228 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 PAWRQ96IZ0 340 aaKnown RBP17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 TMEM47Q9BQJ4 181 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 KRT23Q9C075 422 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 FBXO40Q9UH90 709 aa17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 ZNFX1Q9P2E3 1918 aaKnown RBP17.54■□□□□ 0.4
PPFIA1-225ENST00000638133 KDM4AO75164 1064 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 PGK2P07205 417 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 CHMLP26374 656 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 ZKSCAN3Q9BRR0 538 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 OGDHLQ9ULD0 1010 aa17.53■□□□□ 0.4
PPFIA1-225ENST00000638133 PLA2G6O60733 806 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 NOVP48745 357 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 TRDNQ13061 729 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 UBE2Q1Q7Z7E8 422 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 CHST13Q8NET6 341 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 HOMER2Q9NSB8 354 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 RIPK3Q9Y572 518 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 NR2E3Q9Y5X4 410 aa17.52■□□□□ 0.4
PPFIA1-225ENST00000638133 B4E1Z4 1266 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 NEFLP07196 543 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
PPFIA1-225ENST00000638133 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 EVI5O60447 810 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 CYBAP13498 195 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 KIAA1211Q6ZU35 1233 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 DIS3LQ8TF46 1054 aaKnown RBP17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 IL25Q9H293 177 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 ACAD9Q9H845 621 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 CNPY2Q9Y2B0 182 aa17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
PPFIA1-225ENST00000638133 ALAS1P13196 640 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 ZNF792Q3KQV3 632 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 TKFCQ3LXA3 575 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 LHX8Q68G74 356 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 RASGRP2Q7LDG7 609 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 AGBL1Q96MI9 1066 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
PPFIA1-225ENST00000638133 MKI67P46013 3256 aaKnown RBP17.48■□□□□ 0.39
PPFIA1-225ENST00000638133 SGSM2O43147 1006 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms