RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 FLT4P35916 1363 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 U2AF2P26368 475 aaKnown RBP eCLIP19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 SESN3P58005 492 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 TBC1D22AQ8WUA7 517 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 ZNF445P59923 1031 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 C10orf76Q5T2E6 689 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 BSPRYQ5W0U4 402 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 BABAM1Q9NWV8 329 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 HESX1Q9UBX0 185 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 PCDH11XQ9BZA7 1347 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 PCDH11YQ9BZA8 1340 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 KLC3Q6P597 504 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 PIK3AP1Q6ZUJ8 805 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 CEP19Q96LK0 163 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 NSFL1CQ9UNZ2 370 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 JRKLQ9Y4A0 524 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 RAPGEF6Q8TEU7 1601 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
CACNA1A-247ENST00000637769 NSFP46459 744 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 TMCO5AQ8N6Q1 288 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 LRWD1Q9UFC0 647 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 EXOC8Q8IYI6 725 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 KIAA0586Q9BVV6 1533 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 MID2Q9UJV3 735 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 TMOD1P28289 359 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 EEF1DP29692 281 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 ARHGEF18Q6ZSZ5 1173 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 CCDC197Q8NCU1 140 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 GAS7O60861 476 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 UPF3AQ9H1J1 476 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 CNPY4Q8N129 248 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 SPOUT1Q5T280 376 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 RRAGAQ7L523 313 aa19.69■□□□□ 0.74
CACNA1A-247ENST00000637769 CHMLP26374 656 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 TYW1BQ6NUM6 668 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 RPAINQ86UA6 219 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 PLIN2Q99541 437 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 HGSO14964 777 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 MRPL40Q9NQ50 206 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 ARHGDIAP52565 204 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 MIGA1Q8NAN2 632 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 LMNAP02545 664 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 TRIM60Q495X7 471 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 XPOTO43592 962 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 TNFAIP1Q13829 316 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 PACSIN2Q9UNF0 486 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 DAAM1Q9Y4D1 1078 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 KCNK3O14649 394 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 SCYL3Q8IZE3 742 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 GDAP1L1Q96MZ0 367 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 GPCPD1Q9NPB8 672 aa19.68■□□□□ 0.74
CACNA1A-247ENST00000637769 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 KLHDC4Q8TBB5 520 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 APPBP2Q92624 585 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 TACO1Q9BSH4 297 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 MICAL3Q7RTP6 2002 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 NCAPH2Q6IBW4 605 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 RAPH1Q70E73 1250 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 LRRC43Q8N309 656 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 SUPT20HQ8NEM7 779 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 MED10Q9BTT4 135 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 DEPTORQ8TB45 409 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 KAT6AQ92794 2004 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 GIMAP4Q9NUV9 329 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 ST7Q9NRC1 585 aa19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 ARMCX3Q9UH62 379 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-247ENST00000637769 KRT80Q6KB66 452 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 SBNO2Q9Y2G9 1366 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 H7C1D1 291 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 KCNA4P22459 653 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 DDB1Q16531 1140 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 ATG16L1Q676U5 607 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 CHST3Q7LGC8 479 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 GSTA4O15217 222 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 ARHGEF9O43307 516 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 TXKP42681 527 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 COPG1Q9Y678 874 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 NOS1P29475 1434 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 ATP8B1O43520 1251 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 RNF207Q6ZRF8 634 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 HAUS4Q9H6D7 363 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 IGHDP01880 384 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 ANKRD42Q8N9B4 389 aa19.66■□□□□ 0.74
CACNA1A-247ENST00000637769 EEF1B2P24534 225 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 MCF2L2Q86YR7 1114 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 IQSEC3Q9UPP2 1182 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 GNGT1P63211 74 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 LRRC37BQ96QE4 947 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 SLC12A6Q9UHW9 1150 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 GINS2Q9Y248 185 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 SSH2Q76I76 1423 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 A0A1B0GW55 424 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 MBD4O95243 580 aa19.65■□□□□ 0.74
CACNA1A-247ENST00000637769 DUX4L2P0CJ85 424 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms