RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 ZBED4O75132 1171 aa21.8■■□□□ 1.08
CTSD-209ENST00000637158 CHGBP05060 677 aa21.8■■□□□ 1.08
CTSD-209ENST00000637158 RAG1P15918 1043 aa21.8■■□□□ 1.08
CTSD-209ENST00000637158 GNAT2P19087 354 aa21.8■■□□□ 1.08
CTSD-209ENST00000637158 SNRNP48Q6IEG0 339 aaKnown RBP21.8■■□□□ 1.08
CTSD-209ENST00000637158 MAMDC4Q6UXC1 1216 aa21.8■■□□□ 1.08
CTSD-209ENST00000637158 ZNF467Q7Z7K2 595 aaPredicted RBP21.8■■□□□ 1.08
CTSD-209ENST00000637158 CDX2Q99626 313 aaPredicted RBP21.8■■□□□ 1.08
CTSD-209ENST00000637158 SYNPO2Q9UMS6 1093 aa21.8■■□□□ 1.08
CTSD-209ENST00000637158 TMEM265A0A087WTH1 108 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 GSG1L2A8MUP6 293 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 MINDY4BA8MYZ0 360 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 ZFYP08048 801 aaPredicted RBP21.79■■□□□ 1.08
CTSD-209ENST00000637158 TAL1P17542 331 aaPredicted RBP21.79■■□□□ 1.08
CTSD-209ENST00000637158 RASA1P20936 1047 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 LRRFIP1Q32MZ4 808 aaKnown RBP21.79■■□□□ 1.08
CTSD-209ENST00000637158 ZNF444Q8N0Y2 327 aaPredicted RBP21.79■■□□□ 1.08
CTSD-209ENST00000637158 KBTBD3Q8NAB2 608 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 STARD7Q9NQZ5 370 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 TMEM39AQ9NV64 488 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 RCAN3Q9UKA8 241 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 SMCHD1A6NHR9 2005 aa21.79■■□□□ 1.08
CTSD-209ENST00000637158 COL11A1P12107 1806 aaPredicted RBP21.78■■□□□ 1.08
CTSD-209ENST00000637158 VCANP13611 3396 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 DCDC2CA8MYV0 355 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 PQBP1O60828 265 aaKnown RBP21.78■■□□□ 1.08
CTSD-209ENST00000637158 ADAMTS4O75173 837 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 ACLYP53396 1101 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 ANKRD33Q7Z3H0 272 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 APPBP2Q92624 585 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 CLIP2Q9UDT6 1046 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 FBXO40Q9UH90 709 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 MYH7P12883 1935 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 CDH23Q9H251 3354 aa21.78■■□□□ 1.08
CTSD-209ENST00000637158 DUSP11O75319 330 aaKnown RBP21.77■■□□□ 1.08
CTSD-209ENST00000637158 NDUFB10O96000 172 aa21.77■■□□□ 1.08
CTSD-209ENST00000637158 FPGSQ05932 587 aa21.77■■□□□ 1.08
CTSD-209ENST00000637158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.77■■□□□ 1.08
CTSD-209ENST00000637158 MKL1Q969V6 931 aa21.77■■□□□ 1.08
CTSD-209ENST00000637158 RNPC3Q96LT9 517 aaKnown RBP21.77■■□□□ 1.08
CTSD-209ENST00000637158 COL25A1Q9BXS0 654 aaPredicted RBP21.77■■□□□ 1.08
CTSD-209ENST00000637158 SPC25Q9HBM1 224 aa21.77■■□□□ 1.08
CTSD-209ENST00000637158 FEM1BQ9UK73 627 aa21.77■■□□□ 1.08
CTSD-209ENST00000637158 MROH7Q68CQ1 1323 aa21.77■■□□□ 1.07
CTSD-209ENST00000637158 DNAJC25-GNG10A0A024R161 153 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
CTSD-209ENST00000637158 SMARCA5O60264 1052 aaPredicted RBP21.76■■□□□ 1.07
CTSD-209ENST00000637158 FDX1P10109 184 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 OAZ1P54368 228 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 ANKRD35Q8N283 1001 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 PCSK9Q8NBP7 692 aaKnown RBP21.76■■□□□ 1.07
CTSD-209ENST00000637158 KLHDC9Q8NEP7 349 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 GLT1D1Q96MS3 346 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 NUP88Q99567 741 aaPredicted RBP21.76■■□□□ 1.07
CTSD-209ENST00000637158 ABHD16BQ9H3Z7 469 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 PLXNA1Q9UIW2 1896 aa21.76■■□□□ 1.07
CTSD-209ENST00000637158 ZHX1Q9UKY1 873 aaPredicted RBP21.76■■□□□ 1.07
CTSD-209ENST00000637158 SNAI1O95863 264 aaPredicted RBP21.75■■□□□ 1.07
CTSD-209ENST00000637158 APPP05067 770 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 TDO2P48775 406 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 CPXCR1Q8N123 301 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 CHST13Q8NET6 341 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 MAFAQ8NHW3 353 aaPredicted RBP21.75■■□□□ 1.07
CTSD-209ENST00000637158 OSBP2Q969R2 916 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 SLC38A10Q9HBR0 1119 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 RIPK3Q9Y572 518 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 ELP1O95163 1332 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 SYNRGQ9UMZ2 1314 aa21.75■■□□□ 1.07
CTSD-209ENST00000637158 PRUNE2Q8WUY3 3088 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 IGKV6D-41A0A0C4DH26 115 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 GPAA1O43292 621 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 TTLL1O95922 423 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 ITGB8P26012 769 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 CST5P28325 142 aaPredicted RBP21.74■■□□□ 1.07
CTSD-209ENST00000637158 FAAP100Q0VG06 881 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 ACVR2BQ13705 512 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 KCNA10Q16322 511 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 CCDC174Q6PII3 467 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 STK11IPQ8N1F8 1099 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 GMCL1P1Q8NEA9 526 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 KIFC2Q96AC6 838 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 NACAP1Q9BZK3 213 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 MTMR4Q9NYA4 1195 aa21.74■■□□□ 1.07
CTSD-209ENST00000637158 GREB1LQ9C091 1923 aaPredicted RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 PATL2C9JE40 543 aaKnown RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 SLC3A2P08195 630 aaKnown RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
CTSD-209ENST00000637158 CCSAPQ6IQ19 270 aaPredicted RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 TTYH1Q9H313 450 aaPredicted RBP21.73■■□□□ 1.07
CTSD-209ENST00000637158 DCTPP1Q9H773 170 aa21.73■■□□□ 1.07
CTSD-209ENST00000637158 TIMP1P01033 207 aa21.72■■□□□ 1.07
CTSD-209ENST00000637158 PDE4BQ07343 736 aa21.72■■□□□ 1.07
CTSD-209ENST00000637158 PPP4R3BQ5MIZ7 849 aa21.72■■□□□ 1.07
CTSD-209ENST00000637158 LENG1Q96BZ8 264 aaPredicted RBP21.72■■□□□ 1.07
CTSD-209ENST00000637158 CEP95Q96GE4 821 aa21.72■■□□□ 1.07
CTSD-209ENST00000637158 RAVER2Q9HCJ3 691 aaKnown RBP21.72■■□□□ 1.07
CTSD-209ENST00000637158 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.72■■□□□ 1.07
CTSD-209ENST00000637158 C6orf222P0C671 652 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms