RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 BMP3P12645 472 aa17.78■□□□□ 0.44
CACNA1A-230ENST00000636768 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-230ENST00000636768 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-230ENST00000636768 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
CACNA1A-230ENST00000636768 PFASO15067 1338 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 CEP290O15078 2479 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 FGAP02671 866 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 HSPD1P10809 573 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 SDSP20132 328 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 SLC1A4P43007 532 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 CHMP4CQ96CF2 233 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 OSBPL3Q9H4L5 887 aa17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 RAVER2Q9HCJ3 691 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-230ENST00000636768 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 SEPT4O43236 478 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 ORC4O43929 436 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 NMT2O60551 498 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 COL6A1P12109 1028 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 STAT2P52630 851 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 RRP12Q5JTH9 1297 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 PRAMEF19Q5SWL8 479 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 GMCL1Q96IK5 515 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 SLC38A10Q9HBR0 1119 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-230ENST00000636768 ZMYM6O95789 1325 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 ATP2A1O14983 1001 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 MCCP23508 829 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 ZNF792Q3KQV3 632 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 ANO1Q5XXA6 986 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 DDX11Q96FC9 970 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 IL17RBQ9NRM6 502 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 MTMR7Q9Y216 660 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 DIS3Q9Y2L1 958 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 RIPK3Q9Y572 518 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 TACC3Q9Y6A5 838 aa17.75■□□□□ 0.43
CACNA1A-230ENST00000636768 DNM1LO00429 736 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 FDX1P10109 184 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 FXR1P51114 621 aaKnown RBP eCLIP17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 OAZ1P54368 228 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 HAND2P61296 217 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 ARRDC4Q8NCT1 418 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 CHURC1Q8WUH1 139 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 TINF2Q9BSI4 451 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 SENP6Q9GZR1 1112 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 FBXO40Q9UH90 709 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 NRBP1Q9UHY1 535 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 PARP14Q460N5 1801 aa17.74■□□□□ 0.43
CACNA1A-230ENST00000636768 KBTBD13C9JR72 458 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 HIP1O00291 1037 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 FGRP09769 529 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 SYN1P17600 705 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 LRRC26Q2I0M4 334 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 CCDC96Q2M329 555 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 GJC2Q5T442 439 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 STAG1Q8WVM7 1258 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 HOMER2Q9NSB8 354 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
CACNA1A-230ENST00000636768 RCSD1Q6JBY9 416 aa17.72■□□□□ 0.43
CACNA1A-230ENST00000636768 MFSD6Q6ZSS7 791 aa17.72■□□□□ 0.43
CACNA1A-230ENST00000636768 ANKRD35Q8N283 1001 aa17.72■□□□□ 0.43
CACNA1A-230ENST00000636768 CHST13Q8NET6 341 aa17.72■□□□□ 0.43
CACNA1A-230ENST00000636768 RARBP10826 455 aa17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 RASGRP2Q7LDG7 609 aa17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 PRO3102Q9H379 93 aa17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-230ENST00000636768 COL11A1P12107 1806 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 DNAJC25-GNG10A0A024R161 153 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 ZNF213O14771 459 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 PLA2G6O60733 806 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 TOP1P11387 765 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 TAL1P17542 331 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 NOVP48745 357 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 ATN1P54259 1190 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 MSL3Q8N5Y2 521 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 ACAD9Q9H845 621 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 TCP11L1Q9NUJ3 509 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 MYH4Q9Y623 1939 aa17.7■□□□□ 0.42
CACNA1A-230ENST00000636768 A0A1W2PPC1 479 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 AKR1A1P14550 325 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 LRRC41Q15345 812 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 RNF146Q9NTX7 359 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 PRR12Q9ULL5 1215 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms