RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PARP1P09874 1014 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 CYP2C19P33261 490 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 ANKRD20A12PQ8NF67 263 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 CCDC102AQ96A19 550 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 AGPAT5Q9NUQ2 364 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 ANKIB1Q9P2G1 1089 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 LRP6O75581 1613 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 ITGB4P16144 1822 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 MYH8P13535 1937 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 CHD4Q14839 1912 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 UBE4AQ14139 1066 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 PFKFB3Q16875 520 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 BRIP1Q9BX63 1249 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 BSDC1Q9NW68 430 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 MYH6P13533 1939 aa15.8■□□□□ 0.12
CACNA1A-228ENST00000636610 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 MACROD2A1Z1Q3 448 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 GTPBP6O43824 516 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 ATP2B2Q01814 1243 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 IRF2BP1Q8IU81 584 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 ZNF804BA4D1E1 1349 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 CCDC66A2RUB6 948 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 DTHD1Q6ZMT9 781 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 NAPGQ99747 312 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 MYH13Q9UKX3 1938 aa15.79■□□□□ 0.12
CACNA1A-228ENST00000636610 FCER1AP12319 257 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 SLC35G1Q2M3R5 365 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 ELOA2Q8IYF1 753 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 PLEKHA4Q9H4M7 779 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 EPN1Q9Y6I3 576 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 TSPY3P0CV98 308 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 TSPY8P0CW00 308 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CALM1P0DP23 149 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CALM2P0DP24 149 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CALM3P0DP25 149 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 ARHGAP25P42331 645 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 FAM193AP78312 1265 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 NAALADL2Q58DX5 795 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 AK7Q96M32 723 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 RWDD2AQ9UIY3 292 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CTAGE15A4D2H0 777 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 ZNF185O15231 689 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CYTH3O43739 400 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 DDAH1O94760 285 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CTAGE8P0CG41 777 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 TRIM21P19474 475 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 DNA2P51530 1060 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CCDC122Q5T0U0 273 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CYP26C1Q6V0L0 522 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CTAGE6Q86UF2 777 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 CTAGE4Q8IX94 777 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 SMCR8Q8TEV9 937 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 ADAM21Q9UKJ8 722 aa15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 LUC7L2Q9Y383 392 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-228ENST00000636610 KCTD19Q17RG1 926 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 FAM98CQ17RN3 349 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 USP17L2Q6R6M4 530 aa15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 KRT26Q7Z3Y9 468 aa15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 TMTC1Q8IUR5 882 aa15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 GJA10Q969M2 543 aa15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 UBA5Q9GZZ9 404 aa15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 DISC1Q9NRI5 854 aa15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
CACNA1A-228ENST00000636610 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 NDUFA10O95299 355 aa15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 TECP42680 631 aa15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 TNNT3P45378 269 aaPredicted RBP15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 KIAA1328Q86T90 577 aa15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 NID2Q14112 1375 aa15.77■□□□□ 0.11
CACNA1A-228ENST00000636610 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 FAM170AA1A519 330 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 ANKRD65E5RJM6 399 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 BMP15O95972 392 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 MATR3P43243 847 aaKnown RBP eCLIP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 TSR1Q2NL82 804 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 CSGALNACT2Q8N6G5 542 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 FAN1Q9Y2M0 1017 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 EP400Q96L91 3159 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 PLEKP08567 350 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 ASIC1P78348 528 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 PPP2R5BQ15173 497 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 DYMQ7RTS9 669 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 CLEC10AQ8IUN9 316 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 LACRTQ9GZZ8 138 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms