RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 POU3F3P20264 500 aaPredicted RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 ZAP70P43403 619 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 CDK7P50613 346 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 DYNLL1P63167 89 aaKnown RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 SEPT2Q15019 361 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 TMEM240Q5SV17 173 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 CCSAPQ6IQ19 270 aaPredicted RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 CCDC129Q6ZRS4 1044 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 MAGEB6Q8N7X4 407 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 RHPN1Q8TCX5 695 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 HERVK_113Q902F9 699 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 MMP19Q99542 508 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
CIITA-214ENST00000636238 RIOK1Q9BRS2 568 aaKnown RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 PBX4Q9BYU1 374 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 RLFQ13129 1914 aa8.86□□□□□ -0.99
CIITA-214ENST00000636238 FRMPD3Q5JV73 1810 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 A0A0U1RQG5 324 aaPredicted RBP8.85□□□□□ -0.99
CIITA-214ENST00000636238 A0A1W2PRG0 241 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 ARVCFO00192 962 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 ATP2A1O14983 1001 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 CABYRO75952 493 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 PGK1P00558 417 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 STAT3P40763 770 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 PLS1Q14651 629 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 TMEM132BQ14DG7 1078 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 C8orf34Q49A92 452 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 HSP90AB4PQ58FF6 505 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 PRAMEF19Q5SWL8 479 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 ANO1Q5XXA6 986 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 TSHZ3Q63HK5 1081 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 ATG4CQ96DT6 458 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 BACH2Q9BYV9 841 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 UPF3AQ9H1J1 476 aaKnown RBP8.85□□□□□ -0.99
CIITA-214ENST00000636238 SLC28A3Q9HAS3 691 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 IL23AQ9NPF7 189 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 COG5Q9UP83 839 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 HCN4Q9Y3Q4 1203 aa8.85□□□□□ -0.99
CIITA-214ENST00000636238 SYNRGQ9UMZ2 1314 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 A0A0G2JMZ2 1700 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 MAGEB6P1A0A0J9YX57 407 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 VWA5AO00534 786 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 MPHOSPH10O00566 681 aaKnown RBP8.84□□□□□ -0.99
CIITA-214ENST00000636238 PFKMP08237 780 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 PLCD1P51178 756 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 GJA9P57773 515 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 ICA1Q05084 483 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 ERC1Q8IUD2 1116 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 AMOTL1Q8IY63 956 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 MIGA1Q8NAN2 632 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.84□□□□□ -0.99
CIITA-214ENST00000636238 KIF1BPQ96EK5 621 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 TEX13BQ9BXU2 312 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 PRDM12Q9H4Q4 367 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 ATP8A2Q9NTI2 1148 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 MCM9Q9NXL9 1143 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 FBXO40Q9UH90 709 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 DBNLQ9UJU6 430 aaKnown RBP8.84□□□□□ -0.99
CIITA-214ENST00000636238 PPP1R9AQ9ULJ8 1098 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 SYNPO2Q9UMS6 1093 aa8.84□□□□□ -0.99
CIITA-214ENST00000636238 RBM19Q9Y4C8 960 aaKnown RBP8.84□□□□□ -0.99
CIITA-214ENST00000636238 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
CIITA-214ENST00000636238 ERC2O15083 957 aa8.83□□□□□ -1
CIITA-214ENST00000636238 BMP1P13497 986 aa8.83□□□□□ -1
CIITA-214ENST00000636238 PDE1AP54750 535 aa8.83□□□□□ -1
CIITA-214ENST00000636238 KCNA10Q16322 511 aa8.83□□□□□ -1
CIITA-214ENST00000636238 TTC22Q5TAA0 569 aa8.83□□□□□ -1
CIITA-214ENST00000636238 C16orf59Q7L2K0 433 aa8.83□□□□□ -1
CIITA-214ENST00000636238 FAM126BQ8IXS8 530 aa8.83□□□□□ -1
CIITA-214ENST00000636238 RPUSD2Q8IZ73 545 aaKnown RBP8.83□□□□□ -1
CIITA-214ENST00000636238 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
CIITA-214ENST00000636238 ABHD16BQ9H3Z7 469 aa8.83□□□□□ -1
CIITA-214ENST00000636238 ZNF214Q9UL59 606 aaPredicted RBP8.83□□□□□ -1
CIITA-214ENST00000636238 PCDHA11Q9Y5I1 949 aa8.83□□□□□ -1
CIITA-214ENST00000636238 SALL3Q9BXA9 1300 aa8.82□□□□□ -1
CIITA-214ENST00000636238 CHD9Q3L8U1 2897 aa8.82□□□□□ -1
CIITA-214ENST00000636238 CD4P01730 458 aa8.82□□□□□ -1
CIITA-214ENST00000636238 FGBP02675 491 aa8.82□□□□□ -1
CIITA-214ENST00000636238 FDX1P10109 184 aa8.82□□□□□ -1
CIITA-214ENST00000636238 GSPT1P15170 499 aaKnown RBP8.82□□□□□ -1
CIITA-214ENST00000636238 CSF2RAP15509 400 aa8.82□□□□□ -1
CIITA-214ENST00000636238 MX1P20591 662 aa8.82□□□□□ -1
CIITA-214ENST00000636238 OAZ1P54368 228 aa8.82□□□□□ -1
CIITA-214ENST00000636238 ADGRE1Q14246 886 aa8.82□□□□□ -1
CIITA-214ENST00000636238 ZNF365Q70YC5 407 aa8.82□□□□□ -1
CIITA-214ENST00000636238 AACSQ86V21 672 aa8.82□□□□□ -1
CIITA-214ENST00000636238 SIAH1Q8IUQ4 282 aa8.82□□□□□ -1
CIITA-214ENST00000636238 REPS2Q8NFH8 660 aa8.82□□□□□ -1
CIITA-214ENST00000636238 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
CIITA-214ENST00000636238 CCDC8Q9H0W5 538 aaPredicted RBP8.82□□□□□ -1
CIITA-214ENST00000636238 DCP1AQ9NPI6 582 aaPredicted RBP8.82□□□□□ -1
CIITA-214ENST00000636238 FOCADQ5VW36 1801 aa8.82□□□□□ -1
CIITA-214ENST00000636238 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
CIITA-214ENST00000636238 ZEB2O60315 1214 aa8.81□□□□□ -1
CIITA-214ENST00000636238 SEC24BO95487 1268 aa8.81□□□□□ -1
CIITA-214ENST00000636238 SNAI1O95863 264 aaPredicted RBP8.81□□□□□ -1
CIITA-214ENST00000636238 PGK2P07205 417 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms