RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 LRRC4CQ9HCJ2 640 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 PRDM15P57071 1507 aaPredicted RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 ATP7AQ04656 1500 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 ZFYVE16Q7Z3T8 1539 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 MLH3Q9UHC1 1453 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CD109Q6YHK3 1445 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 INSRP06213 1382 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 EIF3AQ14152 1382 aaKnown RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 ZBED9Q6R2W3 1325 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 RGS13O14921 159 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 KIF3BO15066 747 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 EIF6P56537 245 aaKnown RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 RGL3Q3MIN7 710 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 NAALADL2Q58DX5 795 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 ARHGAP27Q6ZUM4 889 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 C22orf34Q6ZV56 151 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 LSRQ86X29 649 aaPredicted RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 TAB3Q8N5C8 712 aaPredicted RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 DNAJB8Q8NHS0 232 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 RIN3Q8TB24 985 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CPLX3Q8WVH0 158 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 ANTXR1Q9H6X2 564 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 MKNK2Q9HBH9 465 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CEP131Q9UPN4 1083 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 DEPDC5O75140 1603 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 TRPM2O94759 1503 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 NEO1Q92859 1461 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 BRD4O60885 1362 aaPredicted RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 RPGRIP1LQ68CZ1 1315 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 MYBBP1AQ9BQG0 1328 aaKnown RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 TNFRSF10CO14798 259 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 COBLO75128 1261 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 NME1P15531 152 aaKnown RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 DNAJA1P31689 397 aaKnown RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 INTS3Q68E01 1043 aaKnown RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 FAM214BQ7L5A3 538 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 CDH24Q86UP0 819 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 OR6P1Q8NGX9 317 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 PPP1R13LQ8WUF5 828 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 HEXIM2Q96MH2 286 aaKnown RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 GMLQ99445 158 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 KIF2CQ99661 725 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.42□□□□□ -1.86
CD46-219ENST00000636114 GOLGA2P5Q9HBQ8 144 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 INO80Q9ULG1 1556 aaPredicted RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 LMTK2Q8IWU2 1503 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 PLA2R1Q13018 1463 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 TET3O43151 1660 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 TRPM1Q7Z4N2 1603 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 VWDEQ8N2E2 1590 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 GNAT3A8MTJ3 354 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 CEACAM5P06731 702 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 FGRP09769 529 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 ZNF865P0CJ78 1059 aaPredicted RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 GUCY2CP25092 1073 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 POLR2BP30876 1174 aaKnown RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 GBP1P32455 592 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 KIR3DL1P43629 444 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 GIPRP48546 466 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 CD97P48960 835 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 CHMP4BP1P59074 171 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 ZMYM1Q5SVZ6 1142 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 SFRP5Q5T4F7 317 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 MFSD4AQ8N468 514 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 FAM181AQ8N9Y4 354 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 BAHD1Q8TBE0 780 aaPredicted RBP3.42□□□□□ -1.86
CD46-219ENST00000636114 SHDQ96IW2 340 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.42□□□□□ -1.86
CD46-219ENST00000636114 A2MP01023 1474 aa3.42□□□□□ -1.86
CD46-219ENST00000636114 ZMYM4Q5VZL5 1548 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 UBOX5O94941 541 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 SSBP05455 408 aaKnown RBP eCLIP3.41□□□□□ -1.86
CD46-219ENST00000636114 HOXA10P31260 410 aaPredicted RBP3.41□□□□□ -1.86
CD46-219ENST00000636114 OXCT1P55809 520 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 MSMPQ1L6U9 139 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 MCF2L2Q86YR7 1114 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 FAM9BQ8IZU0 186 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 C19orf47Q8N9M1 422 aaKnown RBP3.41□□□□□ -1.86
CD46-219ENST00000636114 NETO1Q8TDF5 533 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 RNF141Q8WVD5 230 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 ANAPC16Q96DE5 110 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 SLC9A7Q96T83 725 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 POLR3GLQ9BT43 218 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 ASPNQ9BXN1 380 aa3.41□□□□□ -1.86
CD46-219ENST00000636114 ZC3H7BQ9UGR2 993 aaKnown RBP3.41□□□□□ -1.86
CD46-219ENST00000636114 MYOM2P54296 1465 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 SCAF11Q99590 1463 aaKnown RBP3.4□□□□□ -1.86
CD46-219ENST00000636114 ACRP10323 421 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 ITIH2P19823 946 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 RNF4P78317 190 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 IFI16Q16666 785 aaKnown RBP3.4□□□□□ -1.86
CD46-219ENST00000636114 RUFY4Q6ZNE9 571 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 PLD6Q8N2A8 252 aaKnown RBP3.4□□□□□ -1.86
CD46-219ENST00000636114 DHRS1Q96LJ7 313 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 KREMEN1Q96MU8 473 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 PUS7Q96PZ0 661 aaKnown RBP3.4□□□□□ -1.86
CD46-219ENST00000636114 SLC12A7Q9Y666 1083 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 CAPN6Q9Y6Q1 641 aa3.4□□□□□ -1.86
CD46-219ENST00000636114 U3KQE9 123 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms