RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SRP68Q9UHB9 627 aaKnown RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 ROBO3Q96MS0 1386 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 KIF28PB7ZC32 967 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 LONRF3Q496Y0 759 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 EHD4Q9H223 541 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 ITIH6Q6UXX5 1313 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 RAD21O60216 631 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 NPM3O75607 178 aaKnown RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 CDK8P49336 464 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 GTF2IP78347 998 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 ATP2B2Q01814 1243 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 KIF4BQ2VIQ3 1234 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 SLFNL1Q499Z3 407 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 CHURC1Q8WUH1 139 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 ZNF830Q96NB3 372 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 TMEM47Q9BQJ4 181 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 USP40Q9NVE5 1235 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 MAN1B1Q9UKM7 699 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 A0A1W2PQC6 194 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 DKC1O60832 514 aaKnown RBP eCLIP5.11□□□□□ -1.596e-8■■■■■ 53.6
SCN1A-210ENST00000635776 TRIM21P19474 475 aaKnown RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 SLC1A4P43007 532 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 LETM2Q2VYF4 491 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 CACNA2D4Q7Z3S7 1137 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 PI4KBQ9UBF8 816 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 ABCB11O95342 1321 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 FOXR2Q6PJQ5 311 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 PCDHB6Q9Y5E3 794 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 TBCAO75347 108 aaKnown RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 CDR1P51861 262 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 PDE4DQ08499 809 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 PPP4R3CPQ6ZMV5 832 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 DHX40Q8IX18 779 aaKnown RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC94Q9BW85 323 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-210ENST00000635776 DISC1Q9NRI5 854 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 FANCLQ9NW38 375 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 TSKSQ9UJT2 592 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 MTMR7Q9Y216 660 aa5.11□□□□□ -1.59
SCN1A-210ENST00000635776 SIPA1L3O60292 1781 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 TNFAIP1Q13829 316 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CALCRLQ16602 461 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 RBM26Q5T8P6 1007 aaKnown RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 KIAA1328Q86T90 577 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CACTINQ8WUQ7 758 aaKnown RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 AMNQ9BXJ7 453 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 GINM1Q9NU53 330 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CNTNAP5Q8WYK1 1306 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 PNMA6FA0A0J9YX94 578 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 PPFIA3O75145 1194 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 ENTPD3O75355 529 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 RPN1P04843 607 aaKnown RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CCNE1P24864 410 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 MOXD1Q6UVY6 613 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 SLC17A8Q8NDX2 589 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 PAGE5Q96GU1 130 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 VPS33BQ9H267 617 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CICQ96RK0 1608 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC66A2RUB6 948 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 TBX3O15119 743 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 PICALMQ13492 652 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 TMEM179Q6ZVK1 233 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 FTOQ9C0B1 505 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 ZMYND12Q9H0C1 365 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 NYAP2Q9P242 653 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 FAM184BQ9ULE4 1060 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 COL22A1Q8NFW1 1626 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 NR5A1Q13285 461 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CRY2Q49AN0 593 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 RTKN2Q8IZC4 609 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CSGALNACT2Q8N6G5 542 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 TBC1D16Q8TBP0 767 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CLIC6Q96NY7 704 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 TANGO6Q9C0B7 1094 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CTAGE15A4D2H0 777 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CTAGE8P0CG41 777 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 FDX1P10109 184 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 IDEP14735 1019 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 STYK1Q6J9G0 422 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CTAGE6Q86UF2 777 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CTAGE4Q8IX94 777 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 OR8K1Q8NGG5 319 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CTAGE9A4FU28 777 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 WDHD1O75717 1129 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-210ENST00000635776 ABCD1P33897 745 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CLUL1Q15846 466 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC40Q4G0X9 1142 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 STRIP1Q5VSL9 837 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 CEP89Q96ST8 783 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 MXD3Q9BW11 206 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 OGFRQ9NZT2 677 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 ARFGEF2Q9Y6D5 1785 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 EFCAB8A8MWE9 144 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 LRRC63Q05C16 580 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 KIF5AQ12840 1032 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 NBPF11Q86T75 865 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 PROM2Q8N271 834 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 NELFBQ8WX92 580 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 GOLGA1Q92805 767 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 METTL14Q9HCE5 456 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms