RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 NSMFQ6X4W1 530 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 CLEC10AQ8IUN9 316 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 DHX37Q8IY37 1157 aaKnown RBP8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 SHISA5Q8N114 240 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 BTN2A2Q8WVV5 523 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 PPP1R14AQ96A00 147 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 CDC6Q99741 560 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 FAM83CQ9BQN1 747 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 SUGT1Q9Y2Z0 365 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 DNAJC25-GNG10A0A024R161 153 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 NOP56O00567 594 aaKnown RBP8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 C22orf34Q6ZV56 151 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 TMC3Q7Z5M5 1100 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 THNSL2Q86YJ6 484 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 DTWD2Q8NBA8 298 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 MFSD3Q96ES6 412 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 IER2Q9BTL4 223 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 FBXL21Q9UKT6 434 aa8.63□□□□□ -1.03
SMARCA2-240ENST00000635392 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 FAM87AP0C7U9 286 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 IBSPP21815 317 aaPredicted RBP8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 CYP7A1P22680 504 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 CHRNA4P43681 627 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 GTF2IRD2BQ6EKJ0 949 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 POMZP3Q6PJE2 187 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 GTF2IRD2Q86UP8 949 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 CD163Q86VB7 1156 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 FIBCD1Q8N539 461 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 C1orf159Q96HA4 380 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 COX4I2Q96KJ9 171 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 GFOD1Q9NXC2 390 aa8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 TPX2Q9ULW0 747 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-240ENST00000635392 FAM83GA6ND36 823 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 PRR33A8MZF0 331 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 SIGLEC6O43699 453 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 KCNH1O95259 989 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 SCG5P05408 212 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 GFRA1P56159 465 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 SUMO1P63165 101 aaKnown RBP8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 GRB10Q13322 594 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 TAF7LQ5H9L4 462 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 NOL9Q5SY16 702 aaKnown RBP8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 NKX2-4Q9H2Z4 354 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 NOL6Q9H6R4 1146 aaKnown RBP8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
SMARCA2-240ENST00000635392 IGF2BP3O00425 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 ZNF865P0CJ78 1059 aaPredicted RBP8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 SDSP20132 328 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 PPP2R5DQ14738 602 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 NTRK3Q16288 839 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 SFRP5Q5T4F7 317 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 ZAR1Q86SH2 424 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 GSTCDQ8NEC7 633 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 SLC7A14Q8TBB6 771 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 MCMBPQ9BTE3 642 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 TRIM39Q9HCM9 518 aa8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 PRDM5Q9NQX1 630 aaPredicted RBP8.6□□□□□ -1.03
SMARCA2-240ENST00000635392 SHISA3A0PJX4 238 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 HMX2A2RU54 273 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 GSG1L2A8MUP6 293 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 IRS4O14654 1257 aaPredicted RBP8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 PRAMEF1O95521 474 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 SRFP11831 508 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 CDK11BP21127 795 aaKnown RBP8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 CTSKP43235 329 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 KIR3DL1P43629 444 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 ANAPC15P60006 121 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 MAP4K2Q12851 820 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 SLC35F1Q5T1Q4 408 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 DENND5AQ6IQ26 1287 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 GIMAP7Q8NHV1 300 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 STAG1Q8WVM7 1258 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 FAM126AQ9BYI3 521 aaPredicted RBP8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 C7orf69Q9H7B7 122 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 CYP26B1Q9NR63 512 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
SMARCA2-240ENST00000635392 C1QTNF9BB2RNN3 333 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 VAMP4O75379 141 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 CBX7O95931 251 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 MYCLP1P12525 358 aaPredicted RBP8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 HOXC12P31275 282 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 STAT3P40763 770 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 TNK2Q07912 1038 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 NMIQ13287 307 aaPredicted RBP8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 RNF180Q86T96 592 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 Q8N3U1 123 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 CRACR2BQ8N4Y2 399 aaPredicted RBP8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 TMEM145Q8NBT3 493 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 KREMEN2Q8NCW0 462 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 CCDC140Q96MF4 163 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 IPO9Q96P70 1041 aaKnown RBP8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 CHST7Q9NS84 486 aa8.58□□□□□ -1.04
SMARCA2-240ENST00000635392 U3KQE9 123 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms