RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 LENG1Q96BZ8 264 aaPredicted RBP18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 DDX11Q96FC9 970 aa18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 CDX2Q99626 313 aaPredicted RBP18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 SEMA6BQ9H3T3 888 aa18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 NRBP1Q9UHY1 535 aa18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 ZNF214Q9UL59 606 aaPredicted RBP18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 CNPY2Q9Y2B0 182 aa18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 DIS3Q9Y2L1 958 aaKnown RBP18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 CTDP1Q9Y5B0 961 aaPredicted RBP18.54■□□□□ 0.56
SNRNP48-203ENST00000634363 PQBP1O60828 265 aaKnown RBP18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 AKR1A1P14550 325 aa18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 RAG1P15918 1043 aa18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 C1orf53Q5VUE5 145 aa18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 CPXCR1Q8N123 301 aa18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 COL25A1Q9BXS0 654 aaPredicted RBP18.53■□□□□ 0.56
SNRNP48-203ENST00000634363 F5H6K3 240 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 ZFYP08048 801 aaPredicted RBP18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 CLTBP09497 229 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 ZNF865P0CJ78 1059 aaPredicted RBP18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 ITGB8P26012 769 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 COPB2P35606 906 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 KLRC3Q07444 240 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 SNRNP48Q6IEG0 339 aaKnown RBP18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 REPS2Q8NFH8 660 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 CLIP2Q9UDT6 1046 aa18.52■□□□□ 0.56
SNRNP48-203ENST00000634363 A0A1W2PQ45 241 aaPredicted RBP18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 A0A1W2PQY0 241 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 GSG1L2A8MUP6 293 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 APPP05067 770 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 RASA1P20936 1047 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 EVI5LQ96CN4 794 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 TEX13BQ9BXU2 312 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 TMEM39AQ9NV64 488 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 RIPK3Q9Y572 518 aa18.51■□□□□ 0.55
SNRNP48-203ENST00000634363 SMAD3P84022 425 aaKnown RBP18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 SBK1Q52WX2 424 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 CENPQQ7L2Z9 268 aaPredicted RBP18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 ZNF444Q8N0Y2 327 aaPredicted RBP18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 PRPF38AQ8NAV1 312 aaKnown RBP18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 MYLIPQ8WY64 445 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 KIFC2Q96AC6 838 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 CCDC136Q96JN2 1154 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 RNPC3Q96LT9 517 aaKnown RBP18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 STARD7Q9NQZ5 370 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 NYAP2Q9P242 653 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 ZHX1Q9UKY1 873 aaPredicted RBP18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
SNRNP48-203ENST00000634363 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 ZBED4O75132 1171 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 SNAI1O95863 264 aaPredicted RBP18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 NDUFB10O96000 172 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 ACLYP53396 1101 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 EPHB4P54760 987 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 KCNA10Q16322 511 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 MAFAQ8NHW3 353 aaPredicted RBP18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 APPBP2Q92624 585 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 OSBP2Q969R2 916 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 OSBPL3Q9H4L5 887 aa18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
SNRNP48-203ENST00000634363 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 PRDM1O75626 825 aa18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 TDO2P48775 406 aa18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 ANKRD35Q8N283 1001 aa18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 TSEN34Q9BSV6 310 aaKnown RBP18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 TTYH1Q9H313 450 aaPredicted RBP18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 ISY1Q9ULR0 285 aaKnown RBP18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 SYNRGQ9UMZ2 1314 aa18.48■□□□□ 0.55
SNRNP48-203ENST00000634363 KIAA0355O15063 1070 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 ADAMTS4O75173 837 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 IRX5P78411 483 aaPredicted RBP18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 FPGSQ05932 587 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 FAAP100Q0VG06 881 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 GIMAP6Q6P9H5 292 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 GREB1LQ9C091 1923 aaPredicted RBP18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 SYNGAP1Q96PV0 1343 aa18.47■□□□□ 0.55
SNRNP48-203ENST00000634363 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 GPAA1O43292 621 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 C6orf222P0C671 652 aaPredicted RBP18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 PDE4AP27815 886 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 ACVR2BQ13705 512 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 LRRC47Q8N1G4 583 aaKnown RBP18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 CEP95Q96GE4 821 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 ZNF287Q9HBT7 754 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 MCM3APO60318 1980 aa18.46■□□□□ 0.55
SNRNP48-203ENST00000634363 MYADML2A6NDP7 307 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 FOSL2P15408 326 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms