RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ZNF792Q3KQV3 632 aa14.37□□□□□ -0.11
UBR1-212ENST00000627960 PPP4R3BQ5MIZ7 849 aa14.37□□□□□ -0.11
UBR1-212ENST00000627960 PRAMEF19Q5SWL8 479 aa14.37□□□□□ -0.11
UBR1-212ENST00000627960 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
UBR1-212ENST00000627960 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
UBR1-212ENST00000627960 TACC3Q9Y6A5 838 aa14.37□□□□□ -0.11
UBR1-212ENST00000627960 TSPY2A6NKD2 308 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 ATP2A1O14983 1001 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 SEPT4O43236 478 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 FGAP02671 866 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 PGK2P07205 417 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 FGRP09769 529 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 BMP3P12645 472 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 NMIQ13287 307 aaPredicted RBP14.36□□□□□ -0.11
UBR1-212ENST00000627960 RILPL2Q969X0 211 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 KIFC2Q96AC6 838 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 TINF2Q9BSI4 451 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 SLC38A10Q9HBR0 1119 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 IL17RBQ9NRM6 502 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 ZMYND8Q9ULU4 1186 aaPredicted RBP14.36□□□□□ -0.11
UBR1-212ENST00000627960 RIPK3Q9Y572 518 aa14.36□□□□□ -0.11
UBR1-212ENST00000627960 CTDP1Q9Y5B0 961 aaPredicted RBP14.36□□□□□ -0.11
UBR1-212ENST00000627960 ORC4O43929 436 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 RANBP6O60518 1105 aaKnown RBP14.35□□□□□ -0.11
UBR1-212ENST00000627960 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
UBR1-212ENST00000627960 LRRC26Q2I0M4 334 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 CPXCR1Q8N123 301 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 ARRDC4Q8NCT1 418 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 GMCL1Q96IK5 515 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 SENP6Q9GZR1 1112 aaPredicted RBP14.35□□□□□ -0.11
UBR1-212ENST00000627960 RAVER2Q9HCJ3 691 aaKnown RBP14.35□□□□□ -0.11
UBR1-212ENST00000627960 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 NRBP1Q9UHY1 535 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 STX8Q9UNK0 236 aa14.35□□□□□ -0.11
UBR1-212ENST00000627960 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 DNM1LO00429 736 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 NMT2O60551 498 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 FDX1P10109 184 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 SDSP20132 328 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 MCCP23508 829 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 NOVP48745 357 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 SLC4A3P48751 1232 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 OAZ1P54368 228 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 ANO1Q5XXA6 986 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 ZNF589Q86UQ0 364 aaPredicted RBP14.34□□□□□ -0.11
UBR1-212ENST00000627960 CHURC1Q8WUH1 139 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 STAG1Q8WVM7 1258 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 GDF15Q99988 308 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
UBR1-212ENST00000627960 ZMYM6O95789 1325 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
UBR1-212ENST00000627960 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
UBR1-212ENST00000627960 DNAJC25-GNG10A0A024R161 153 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 PLA2G6O60733 806 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 SYN1P17600 705 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 BMP8BP34820 402 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 SLC1A4P43007 532 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 STAT2P52630 851 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
UBR1-212ENST00000627960 RCSD1Q6JBY9 416 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.12
UBR1-212ENST00000627960 FAM160B2Q86V87 743 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 MSL3Q8N5Y2 521 aaKnown RBP14.33□□□□□ -0.12
UBR1-212ENST00000627960 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 DDX11Q96FC9 970 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 MCM3APO60318 1980 aa14.33□□□□□ -0.12
UBR1-212ENST00000627960 ZNF865P0CJ78 1059 aaPredicted RBP14.32□□□□□ -0.12
UBR1-212ENST00000627960 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
UBR1-212ENST00000627960 MFAP1P55081 439 aaKnown RBP14.32□□□□□ -0.12
UBR1-212ENST00000627960 CHMP4CQ96CF2 233 aa14.32□□□□□ -0.12
UBR1-212ENST00000627960 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
UBR1-212ENST00000627960 TCP11L1Q9NUJ3 509 aa14.32□□□□□ -0.12
UBR1-212ENST00000627960 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
UBR1-212ENST00000627960 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
UBR1-212ENST00000627960 KBTBD13C9JR72 458 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 MAGEA10P43363 369 aaPredicted RBP14.31□□□□□ -0.12
UBR1-212ENST00000627960 ATN1P54259 1190 aaPredicted RBP14.31□□□□□ -0.12
UBR1-212ENST00000627960 HAND2P61296 217 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 LRRC41Q15345 812 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
UBR1-212ENST00000627960 MAMDC4Q6UXC1 1216 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 KCTD1Q719H9 257 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 ANKRD35Q8N283 1001 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 DNAH12Q6ZR08 3092 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 ZNF536O15090 1300 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 SYNGAP1Q96PV0 1343 aa14.31□□□□□ -0.12
UBR1-212ENST00000627960 SNAI1O95863 264 aaPredicted RBP14.3□□□□□ -0.12
UBR1-212ENST00000627960 RARBP10826 455 aa14.3□□□□□ -0.12
UBR1-212ENST00000627960 PCP11498 1178 aaKnown RBP14.3□□□□□ -0.12
UBR1-212ENST00000627960 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
UBR1-212ENST00000627960 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
UBR1-212ENST00000627960 AKNAD1Q5T1N1 836 aa14.3□□□□□ -0.12
UBR1-212ENST00000627960 CWC27Q6UX04 472 aaKnown RBP14.3□□□□□ -0.12
UBR1-212ENST00000627960 RASGRP2Q7LDG7 609 aa14.3□□□□□ -0.12
UBR1-212ENST00000627960 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
UBR1-212ENST00000627960 DCAF4Q8WV16 495 aa14.3□□□□□ -0.12
UBR1-212ENST00000627960 AGBL1Q96MI9 1066 aa14.3□□□□□ -0.12
UBR1-212ENST00000627960 XPNPEP3Q9NQH7 507 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms