RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 DAGLBQ8NCG7 672 aa5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 NKD1Q969G9 470 aa5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 SPON2Q9BUD6 331 aa5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 MENTQ9BUN1 341 aa5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 UBP1Q9NZI7 540 aa5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 CNOT11Q9UKZ1 510 aaKnown RBP5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 PCDHA11Q9Y5I1 949 aa5.41□□□□□ -1.54
PTP4A2-220ENST00000627328 WASH4PA8MWX3 477 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 ZGLP1P0C6A0 271 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 VAMP1P23763 118 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 MCM4P33991 863 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 HMGA2P52926 109 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 NMIQ13287 307 aaPredicted RBP5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 LDLRAD1Q5T700 205 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 NBPF12Q5TAG4 269 aaPredicted RBP5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 INTS3Q68E01 1043 aaKnown RBP5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 ZDHHC14Q8IZN3 488 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 ANKS4BQ8N8V4 417 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 SLC16A11Q8NCK7 471 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 ATG4CQ96DT6 458 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 BACH2Q9BYV9 841 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 SLC6A17Q9H1V8 727 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 CWC22Q9HCG8 908 aaKnown RBP5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 ZNF281Q9Y2X9 895 aa5.4□□□□□ -1.54
PTP4A2-220ENST00000627328 MYOCOSA0A1B0GUC4 107 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 TNFRSF10CO14798 259 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 CLEC3AO75596 197 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 NME1P15531 152 aaKnown RBP5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 TNFRSF1AP19438 455 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 MFAP1P55081 439 aaKnown RBP5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 CLCQ05315 142 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 NBPF9Q3BBW0 867 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 HHIPL2Q6UWX4 724 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 GK5Q6ZS86 529 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 ZNF605Q86T29 641 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 DHRS1Q96LJ7 313 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 BDH2Q9BUT1 245 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 HDAC8Q9BY41 377 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 PRR13Q9NZ81 148 aa5.39□□□□□ -1.55
PTP4A2-220ENST00000627328 SHISA3A0PJX4 238 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 AFF3P51826 1226 aaKnown RBP5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 PCBP3P57721 371 aaKnown RBP5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 FANCCQ00597 558 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 TEKQ02763 1124 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 FRMD5Q7Z6J6 570 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 USP48Q86UV5 1035 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 TAB3Q8N5C8 712 aaPredicted RBP5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 LINC00116Q8NCU8 138 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 LINC01599Q8WXQ3 324 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 EAF1Q96JC9 268 aaPredicted RBP5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 SPATA32Q96LK8 384 aa5.38□□□□□ -1.55
PTP4A2-220ENST00000627328 SIGLEC6O43699 453 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 FSHBP01225 129 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 ERVFC1P60507 584 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 COL9A2Q14055 689 aaPredicted RBP5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 HOMEZQ8IX15 550 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 RNF34Q969K3 372 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 SP110Q9HB58 689 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 GCM1Q9NP62 436 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 ZNRF3Q9ULT6 936 aa5.37□□□□□ -1.55
PTP4A2-220ENST00000627328 SSU72P8A0A1W2PR75 194 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 SCAMP3O14828 347 aaKnown RBP5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 KIR2DL1P43626 348 aaPredicted RBP5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 KIR2DL2P43627 348 aaPredicted RBP5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 SSPNQ14714 243 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 ZNF827Q17R98 1081 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 USHBP1Q8N6Y0 703 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 TCTN2Q96GX1 697 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 TM9SF2Q99805 663 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 RNF32Q9H0A6 362 aa5.36□□□□□ -1.55
PTP4A2-220ENST00000627328 POLR2BP30876 1174 aaKnown RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 RBBP8NLQ8NC74 664 aaPredicted RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 SMARCC1Q92922 1105 aaPredicted RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 DACT3Q96B18 629 aaPredicted RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 SIGLEC10Q96LC7 697 aa5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 SLITRK6Q9H5Y7 841 aa5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 LUC7LQ9NQ29 371 aaKnown RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 DDX41Q9UJV9 622 aaKnown RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 TCFL5Q9UL49 500 aa5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 YBX2Q9Y2T7 364 aaKnown RBP5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 PCDHB12Q9Y5F1 795 aa5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 IRAK3Q9Y616 596 aa5.35□□□□□ -1.55
PTP4A2-220ENST00000627328 RBAK-RBAKDNI3L0D1 243 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 PRAMEF1O95521 474 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 PI3P19957 117 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 TMC3Q7Z5M5 1100 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 TMEM192Q8IY95 271 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 ZNF654Q8IZM8 581 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 MAP6Q96JE9 813 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 SLC6A18Q96N87 628 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 FERD3LQ96RJ6 166 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 SLC9A7Q96T83 725 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 G6PC3Q9BUM1 346 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 PRDM14Q9GZV8 571 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 MKRN2Q9H000 416 aaKnown RBP5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 C19orf44Q9H6X5 657 aa5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 ZNF552Q9H707 407 aaPredicted RBP5.34□□□□□ -1.55
PTP4A2-220ENST00000627328 CHST7Q9NS84 486 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms