RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 SLC39A5Q6ZMH5 540 aa16.13■□□□□ 0.17
SOX2-OT-241ENST00000626948 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-241ENST00000626948 PRPF38AQ8NAV1 312 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-241ENST00000626948 RAVER2Q9HCJ3 691 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-241ENST00000626948 MCM3APO60318 1980 aa16.13■□□□□ 0.17
SOX2-OT-241ENST00000626948 ADCY6O43306 1168 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 RTP1P59025 263 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 TFAP4Q01664 338 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 SNX17Q15036 470 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 TDHQ8IZJ6 230 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 GMCL1P1Q8NEA9 526 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 KIFC2Q96AC6 838 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 TEX13BQ9BXU2 312 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 DIS3Q9Y2L1 958 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 ZNF536O15090 1300 aa16.12■□□□□ 0.17
SOX2-OT-241ENST00000626948 EYSQ5T1H1 3165 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 TTLL1O95922 423 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 KCTD2Q14681 263 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 Q7L0L9 218 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 NAPBQ9H115 298 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 CDH23Q9H251 3354 aa16.11■□□□□ 0.17
SOX2-OT-241ENST00000626948 LCTP09848 1927 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 ADAMTS4O75173 837 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 PGK1P00558 417 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 NOVP48745 357 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 SH3RF1Q7Z6J0 888 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 ZNF589Q86UQ0 364 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 SYNPO2Q9UMS6 1093 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
SOX2-OT-241ENST00000626948 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 MYADML2A6NDP7 307 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 FGRP09769 529 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 TSPY3P0CV98 308 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 TSPY8P0CW00 308 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 BMP3P12645 472 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 ITGB8P26012 769 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 MAMDC4Q6UXC1 1216 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 EVI5LQ96CN4 794 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 ATP11BQ9Y2G3 1177 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 ASTN1O14525 1302 aa16.09■□□□□ 0.17
SOX2-OT-241ENST00000626948 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 IGHDP01880 384 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 SLC4A3P48751 1232 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 SNAP25P60880 206 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 PDE4BQ07343 736 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 SMC5Q8IY18 1101 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 LNPKQ9C0E8 428 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 XPNPEP3Q9NQH7 507 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 PDLIM7Q9NR12 457 aa16.08■□□□□ 0.16
SOX2-OT-241ENST00000626948 KBTBD13C9JR72 458 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 ZBED4O75132 1171 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 FGAP02671 866 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 MCCP23508 829 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 COPB2P35606 906 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 ALX1Q15699 326 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 GMCL1Q96IK5 515 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 ZNF287Q9HBT7 754 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 UNC80Q8N2C7 3258 aa16.07■□□□□ 0.16
SOX2-OT-241ENST00000626948 LRRC37A2A6NM11 1700 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 RARBP10826 455 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 PTGS1P23219 599 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 NMIQ13287 307 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 C9orf50Q5SZB4 431 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
SOX2-OT-241ENST00000626948 A0A1W2PQ45 241 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms