RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ZNF444Q8N0Y2 327 aaPredicted RBP23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 SLC5A4Q9NY91 659 aa23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 DDX20Q9UHI6 824 aaKnown RBP23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 VWA5AO00534 786 aa23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 COBLO75128 1261 aa23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 COL6A1P12109 1028 aa23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 CYBAP13498 195 aa23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 CNGA1P29973 690 aa23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 RIOX2Q8IUF8 465 aa23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 NUP88Q99567 741 aaPredicted RBP23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 RBM8AQ9Y5S9 174 aaKnown RBP23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
R3HCC1-210ENST00000625275 NDUFB10O96000 172 aa23.53■■□□□ 1.36
R3HCC1-210ENST00000625275 FCER1AP12319 257 aa23.53■■□□□ 1.36
R3HCC1-210ENST00000625275 TRPV1Q8NER1 839 aa23.53■■□□□ 1.36
R3HCC1-210ENST00000625275 SLF1Q9BQI6 1058 aa23.53■■□□□ 1.36
R3HCC1-210ENST00000625275 CTNNA3Q9UI47 895 aa23.53■■□□□ 1.36
R3HCC1-210ENST00000625275 ZNF214Q9UL59 606 aaPredicted RBP23.53■■□□□ 1.36
R3HCC1-210ENST00000625275 F5H6K3 240 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 SLC3A2P08195 630 aaKnown RBP23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 HAND2P61296 217 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 PDE4BQ07343 736 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 KLRC3Q07444 240 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 PPARAQ07869 468 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 REPS2Q8NFH8 660 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 CEP95Q96GE4 821 aa23.52■■□□□ 1.36
R3HCC1-210ENST00000625275 COPB2P35606 906 aa23.51■■□□□ 1.35
R3HCC1-210ENST00000625275 MTMR4Q9NYA4 1195 aa23.51■■□□□ 1.35
R3HCC1-210ENST00000625275 CLIP2Q9UDT6 1046 aa23.51■■□□□ 1.35
R3HCC1-210ENST00000625275 SYNPO2Q9UMS6 1093 aa23.51■■□□□ 1.35
R3HCC1-210ENST00000625275 STAT3P40763 770 aa23.5■■□□□ 1.35
R3HCC1-210ENST00000625275 NECTIN1Q15223 517 aa23.5■■□□□ 1.35
R3HCC1-210ENST00000625275 MAML3Q96JK9 1138 aa23.5■■□□□ 1.35
R3HCC1-210ENST00000625275 MMP19Q99542 508 aa23.5■■□□□ 1.35
R3HCC1-210ENST00000625275 ANAPC4Q9UJX5 808 aa23.5■■□□□ 1.35
R3HCC1-210ENST00000625275 ZMYND8Q9ULU4 1186 aaPredicted RBP23.5■■□□□ 1.35
R3HCC1-210ENST00000625275 TTLL1O95922 423 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 TSPY3P0CV98 308 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 TSPY8P0CW00 308 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 CTDSPL2Q05D32 466 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 IMMTQ16891 758 aaKnown RBP23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 NEDD1Q8NHV4 660 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 MKL1Q969V6 931 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 USP26Q9BXU7 913 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 A0A1W2PPC1 479 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 ZNF213O14771 459 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 EPB41L2O43491 1005 aaKnown RBP23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 EIF5BO60841 1220 aaKnown RBP23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 CYP21A2P08686 494 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 KCTD2Q14681 263 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 LRRC47Q8N1G4 583 aaKnown RBP23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 BACH2Q9BYV9 841 aa23.49■■□□□ 1.35
R3HCC1-210ENST00000625275 TBC1D10CQ8IV04 446 aa23.48■■□□□ 1.35
R3HCC1-210ENST00000625275 PRPF38AQ8NAV1 312 aaKnown RBP23.48■■□□□ 1.35
R3HCC1-210ENST00000625275 GMCL1P1Q8NEA9 526 aa23.48■■□□□ 1.35
R3HCC1-210ENST00000625275 TEX13BQ9BXU2 312 aa23.48■■□□□ 1.35
R3HCC1-210ENST00000625275 TAF6LQ9Y6J9 622 aa23.48■■□□□ 1.35
R3HCC1-210ENST00000625275 LTBP2Q14767 1821 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 DNM1LO00429 736 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 SLC27A2O14975 620 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 SEPT4O43236 478 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 LRRC26Q2I0M4 334 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 FAM47AQ5JRC9 791 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 TACC3Q9Y6A5 838 aa23.47■■□□□ 1.35
R3HCC1-210ENST00000625275 PGK2P07205 417 aa23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 SYN1P17600 705 aa23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 HSPA4P34932 840 aa23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 TFAP4Q01664 338 aa23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 SNRNP48Q6IEG0 339 aaKnown RBP23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 GDF15Q99988 308 aa23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.46■■□□□ 1.35
R3HCC1-210ENST00000625275 INCENPQ9NQS7 918 aa23.45■■□□□ 1.34
R3HCC1-210ENST00000625275 FEM1BQ9UK73 627 aa23.45■■□□□ 1.34
R3HCC1-210ENST00000625275 DIS3Q9Y2L1 958 aaKnown RBP23.45■■□□□ 1.34
R3HCC1-210ENST00000625275 ATP2A1O14983 1001 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 ZNF792Q3KQV3 632 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 PRAMEF19Q5SWL8 479 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 AKNAD1Q5T1N1 836 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 ANO1Q5XXA6 986 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 ARRDC4Q8NCT1 418 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 STAG1Q8WVM7 1258 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 KIFC2Q96AC6 838 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 SENP6Q9GZR1 1112 aaPredicted RBP23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 NRBP1Q9UHY1 535 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 DNAH12Q6ZR08 3092 aa23.44■■□□□ 1.34
R3HCC1-210ENST00000625275 ZBED4O75132 1171 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 FGRP09769 529 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 BMP8BP34820 402 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 PPP4R3BQ5MIZ7 849 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 RNF20Q5VTR2 975 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 SLFN13Q68D06 897 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 TINF2Q9BSI4 451 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 CTDP1Q9Y5B0 961 aaPredicted RBP23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 BMP3P12645 472 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 GJC2Q5T442 439 aaPredicted RBP23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 RASEFQ8IZ41 740 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 CPXCR1Q8N123 301 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 SLC38A10Q9HBR0 1119 aa23.43■■□□□ 1.34
R3HCC1-210ENST00000625275 RIPK3Q9Y572 518 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms