RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZBBXA8MT70 800 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 SRGAP3O43295 1099 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 TTC6Q86TZ1 520 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 RIOX2Q8IUF8 465 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 MIGA1Q8NAN2 632 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 WNT8AQ9H1J5 351 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
SNX1-214ENST00000625244 MYH1P12882 1939 aa16.97■□□□□ 0.31
SNX1-214ENST00000625244 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.31
SNX1-214ENST00000625244 ARHGEF15O94989 841 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 CYP7A1P22680 504 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 EVX2Q03828 476 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 ARNTL2Q8WYA1 636 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 MEIS3Q99687 375 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 UPF3AQ9H1J1 476 aaKnown RBP16.96■□□□□ 0.31
SNX1-214ENST00000625244 ADAMTS5Q9UNA0 930 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 C5orf42Q9H799 3197 aa16.96■□□□□ 0.31
SNX1-214ENST00000625244 CTAGE5O15320 804 aa16.95■□□□□ 0.3
SNX1-214ENST00000625244 GJA9P57773 515 aa16.95■□□□□ 0.3
SNX1-214ENST00000625244 MSL3Q8N5Y2 521 aaKnown RBP16.95■□□□□ 0.3
SNX1-214ENST00000625244 NOC4LQ9BVI4 516 aaKnown RBP16.95■□□□□ 0.3
SNX1-214ENST00000625244 STAT3P40763 770 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 GABPAQ06546 454 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 TTLL4Q14679 1199 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 CLEC10AQ8IUN9 316 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 SIAH1Q8IUQ4 282 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 RPUSD2Q8IZ73 545 aaKnown RBP16.94■□□□□ 0.3
SNX1-214ENST00000625244 GJD3Q8N144 294 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 SLC43A3Q8NBI5 491 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 SCLYQ96I15 445 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 SPC25Q9HBM1 224 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
SNX1-214ENST00000625244 ZAP70P43403 619 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 TAP1Q03518 808 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 GRB10Q13322 594 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 MAMDC4Q6UXC1 1216 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
SNX1-214ENST00000625244 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
SNX1-214ENST00000625244 MYO5AQ9Y4I1 1855 aaKnown RBP16.93■□□□□ 0.3
SNX1-214ENST00000625244 LPXNO60711 386 aa16.92■□□□□ 0.3
SNX1-214ENST00000625244 BEX3Q00994 111 aa16.92■□□□□ 0.3
SNX1-214ENST00000625244 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
SNX1-214ENST00000625244 FAM178BQ8IXR5 827 aa16.92■□□□□ 0.3
SNX1-214ENST00000625244 TMX2Q9Y320 296 aa16.92■□□□□ 0.3
SNX1-214ENST00000625244 GRIN2DO15399 1336 aa16.92■□□□□ 0.3
SNX1-214ENST00000625244 ZDBF2Q9HCK1 2354 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 VWA5AO00534 786 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 WDR46O15213 610 aaKnown RBP16.91■□□□□ 0.3
SNX1-214ENST00000625244 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
SNX1-214ENST00000625244 ALADP13716 330 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 MTX1Q13505 466 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 CXCL17Q6UXB2 119 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 ANKS1AQ92625 1134 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 AGBL1Q96MI9 1066 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 PHOX2BQ99453 314 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 KCNH6Q9H252 994 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
SNX1-214ENST00000625244 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
SNX1-214ENST00000625244 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
SNX1-214ENST00000625244 DNAJC25-GNG10A0A024R161 153 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 B4GALT4O60513 344 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
SNX1-214ENST00000625244 ITGA7Q13683 1181 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 CCDC158Q5M9N0 1113 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 TMEM179Q6ZVK1 233 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
SNX1-214ENST00000625244 ZNF318Q5VUA4 2279 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 IGSF3O75054 1194 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 IDH1O75874 414 aaKnown RBP16.89■□□□□ 0.29
SNX1-214ENST00000625244 NKX3-2P78367 333 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 G3BP1Q13283 466 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNX1-214ENST00000625244 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 ARHGEF10LQ9HCE6 1279 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 PPP1R9AQ9ULJ8 1098 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 MYO15AQ9UKN7 3530 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 ASTN1O14525 1302 aa16.89■□□□□ 0.29
SNX1-214ENST00000625244 IL9P15248 144 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 COPB2P35606 906 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 ICA1Q05084 483 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 DEFB128Q7Z7B8 93 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
SNX1-214ENST00000625244 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.88■□□□□ 0.29
SNX1-214ENST00000625244 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 FGD4Q96M96 766 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 ABHD16BQ9H3Z7 469 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 UBE2ZQ9H832 354 aaPredicted RBP16.88■□□□□ 0.29
SNX1-214ENST00000625244 SMC4Q9NTJ3 1288 aa16.88■□□□□ 0.29
SNX1-214ENST00000625244 NOB1Q9ULX3 412 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms