RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 FERMT3Q86UX7 667 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 NOSTRINQ8IVI9 506 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 ADGRF4Q8IZF3 695 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00963-220ENST00000625171 TNFRSF25Q93038 417 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 JMJD4Q9H9V9 463 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 AS3MTQ9HBK9 375 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 RTEL1Q9NZ71 1219 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 UBE2Q2LH0YL09 131 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 M0R2N6 131 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 ZBTB5O15062 677 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
LINC00963-220ENST00000625171 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 GOLGA8HP0CJ92 632 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 PTPRAP18433 802 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 NASPP49321 788 aaPredicted RBP13.54□□□□□ -0.24
LINC00963-220ENST00000625171 MAP3K9P80192 1104 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 RILPL1Q5EBL4 403 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 CST9Q5W186 159 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
LINC00963-220ENST00000625171 KRT26Q7Z3Y9 468 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
LINC00963-220ENST00000625171 ACER1Q8TDN7 264 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 GLT8D2Q9H1C3 349 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.54□□□□□ -0.24
LINC00963-220ENST00000625171 GJB4Q9NTQ9 266 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 SEC63Q9UGP8 760 aaKnown RBP13.54□□□□□ -0.24
LINC00963-220ENST00000625171 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 SSC5DA1L4H1 1573 aa13.54□□□□□ -0.24
LINC00963-220ENST00000625171 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 USP17L10C9JJH3 530 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 STXBP3O00186 592 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 YEATS4O95619 227 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 FDX1P10109 184 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 GNA11P29992 359 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 INPP5BP32019 993 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 KRT2P35908 639 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 ATP2B2Q01814 1243 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 FOXD4L5Q5VV16 416 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-220ENST00000625171 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 FOXD4L4Q8WXT5 416 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-220ENST00000625171 WRNIP1Q96S55 665 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 VPS54Q9P1Q0 977 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 FEM1BQ9UK73 627 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 PCDHA4Q9UN74 947 aa13.53□□□□□ -0.24
LINC00963-220ENST00000625171 KIF28PB7ZC32 967 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.25
LINC00963-220ENST00000625171 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
LINC00963-220ENST00000625171 MBD3O95983 291 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 NF2P35240 595 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 BACE1P56817 501 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 NLRP5P59047 1200 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 UBE2HP62256 183 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 SAPCD2Q86UD0 394 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 PIGSQ96S52 555 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 MAF1Q9H063 256 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 PICK1Q9NRD5 415 aa13.52□□□□□ -0.25
LINC00963-220ENST00000625171 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
LINC00963-220ENST00000625171 TRAK2O60296 914 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 IREB2P48200 963 aaKnown RBP13.51□□□□□ -0.25
LINC00963-220ENST00000625171 STAT2P52630 851 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 FKBP1BP68106 108 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 SLC39A14Q15043 492 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
LINC00963-220ENST00000625171 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 BLIDQ8IZY5 108 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 LINC00301Q8NCQ3 95 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
LINC00963-220ENST00000625171 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 KCNJ14Q9UNX9 436 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 SCAF8Q9UPN6 1271 aaKnown RBP13.51□□□□□ -0.25
LINC00963-220ENST00000625171 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 AFG3L2Q9Y4W6 797 aa13.51□□□□□ -0.25
LINC00963-220ENST00000625171 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms