RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 NEMFO60524 1076 aa17.32■□□□□ 0.36
ATRX-211ENST00000623321 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
ATRX-211ENST00000623321 GUCY1A2P33402 732 aa17.32■□□□□ 0.36
ATRX-211ENST00000623321 TRIM29Q14134 588 aa17.32■□□□□ 0.36
ATRX-211ENST00000623321 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
ATRX-211ENST00000623321 ANGEL2Q5VTE6 544 aaKnown RBP17.32■□□□□ 0.36
ATRX-211ENST00000623321 MIGA2Q7L4E1 593 aa17.32■□□□□ 0.36
ATRX-211ENST00000623321 LRRC47Q8N1G4 583 aaKnown RBP17.32■□□□□ 0.36
ATRX-211ENST00000623321 STAG2Q8N3U4 1231 aa17.32■□□□□ 0.36
ATRX-211ENST00000623321 MRPS27Q92552 414 aaKnown RBP17.32■□□□□ 0.36
ATRX-211ENST00000623321 ADARB2Q9NS39 739 aaKnown RBP17.32■□□□□ 0.36
ATRX-211ENST00000623321 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 GH2P01242 217 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 EEF2P13639 858 aaKnown RBP17.31■□□□□ 0.36
ATRX-211ENST00000623321 ME1P48163 572 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 HIRAP54198 1017 aaPredicted RBP17.31■□□□□ 0.36
ATRX-211ENST00000623321 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 OTUD7BQ6GQQ9 843 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 FMR1NBQ8N0W7 255 aaPredicted RBP17.31■□□□□ 0.36
ATRX-211ENST00000623321 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 SRCAPQ6ZRS2 3230 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
ATRX-211ENST00000623321 YEATS4O95619 227 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 SNHG28P0DPA3 235 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 PDHBP11177 359 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 JAG1P78504 1218 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 ICA1Q05084 483 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 PKN1Q16512 942 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 KRT40Q6A162 431 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 DHX40Q8IX18 779 aaKnown RBP17.31■□□□□ 0.36
ATRX-211ENST00000623321 CEP57L1Q8IYX8 460 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
ATRX-211ENST00000623321 TSC1Q92574 1164 aa17.31■□□□□ 0.36
ATRX-211ENST00000623321 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 KLRF2D3W0D1 207 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 SMARCA1P28370 1054 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 BRAPQ7Z569 592 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
ATRX-211ENST00000623321 GOLGA8HP0CJ92 632 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 XBP1P17861 261 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 ASPRV1Q53RT3 343 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 NAT10Q9H0A0 1025 aaKnown RBP17.29■□□□□ 0.36
ATRX-211ENST00000623321 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 SMTNL1A8MU46 457 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 BECN2A8MW95 431 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 CAP2P40123 477 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 ANKRD7Q92527 254 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 L3MBTL3Q96JM7 780 aaPredicted RBP17.29■□□□□ 0.36
ATRX-211ENST00000623321 SPZ1Q9BXG8 430 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 ZBTB21Q9ULJ3 1066 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 SYNPO2Q9UMS6 1093 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 PPP2R3BQ9Y5P8 575 aa17.29■□□□□ 0.36
ATRX-211ENST00000623321 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 PITPNM2Q9BZ72 1349 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 SYCP1Q15431 976 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 PFKFB3Q16875 520 aaPredicted RBP17.28■□□□□ 0.36
ATRX-211ENST00000623321 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 LRRC8AQ8IWT6 810 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 BPIFA3Q9BQP9 254 aa17.28■□□□□ 0.36
ATRX-211ENST00000623321 MYH6P13533 1939 aa17.27■□□□□ 0.36
ATRX-211ENST00000623321 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
ATRX-211ENST00000623321 CYTH3O43739 400 aa17.27■□□□□ 0.36
ATRX-211ENST00000623321 SCG2P13521 617 aa17.27■□□□□ 0.36
ATRX-211ENST00000623321 KIF23Q02241 960 aaPredicted RBP17.27■□□□□ 0.36
ATRX-211ENST00000623321 ZNF543Q08ER8 600 aa17.27■□□□□ 0.36
ATRX-211ENST00000623321 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.36
ATRX-211ENST00000623321 ZMYND15Q9H091 742 aa17.27■□□□□ 0.36
ATRX-211ENST00000623321 GLTPD2A6NH11 291 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 MMP1P03956 469 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 ASNSP08243 561 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 STK38Q15208 465 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 SAFBQ15424 915 aaKnown RBP eCLIP17.27■□□□□ 0.35
ATRX-211ENST00000623321 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.35
ATRX-211ENST00000623321 DCAF15Q66K64 600 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.35
ATRX-211ENST00000623321 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
ATRX-211ENST00000623321 F5H6K3 240 aa17.26■□□□□ 0.35
ATRX-211ENST00000623321 KLRC3Q07444 240 aa17.26■□□□□ 0.35
ATRX-211ENST00000623321 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
ATRX-211ENST00000623321 SLFN13Q68D06 897 aa17.26■□□□□ 0.35
ATRX-211ENST00000623321 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
ATRX-211ENST00000623321 C16orf45Q96MC5 204 aaPredicted RBP17.26■□□□□ 0.35
ATRX-211ENST00000623321 GINM1Q9NU53 330 aa17.26■□□□□ 0.35
ATRX-211ENST00000623321 TNNT1P13805 278 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 NDUFA8P51970 172 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 SMAP1Q8IYB5 467 aaPredicted RBP17.25■□□□□ 0.35
ATRX-211ENST00000623321 AOPEPQ8N6M6 819 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 RIOX1Q9H6W3 641 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms