RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CCDC96Q2M329 555 aa23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 FAM83BQ5T0W9 1011 aa23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 HSCBQ8IWL3 235 aa23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 CCDC144CPQ8IYA2 1237 aa23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 SMCR8Q8TEV9 937 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 GTF3C6Q969F1 213 aa23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 ASCC2Q9H1I8 757 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-221ENST00000622702 ADGRA2Q96PE1 1338 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 K7ELQ4 463 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 PLA2G6O60733 806 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 CDC27P30260 824 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 CCT2P78371 535 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 SP3Q02447 781 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 SCRN1Q12765 414 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 C17orf99Q6UX52 265 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 KCTD1Q719H9 257 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 STAG2Q8N3U4 1231 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 CHMP4CQ96CF2 233 aa23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 RBM19Q9Y4C8 960 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-221ENST00000622702 FRMPD2Q68DX3 1309 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-221ENST00000622702 GOLGA8HP0CJ92 632 aa23.07■■□□□ 1.28
PDLIM2-221ENST00000622702 IRX3P78415 501 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-221ENST00000622702 LZTS2Q9BRK4 669 aa23.07■■□□□ 1.28
PDLIM2-221ENST00000622702 RPAP3Q9H6T3 665 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-221ENST00000622702 NCOA5Q9HCD5 579 aaKnown RBP23.07■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L15C9J2P7 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L13C9JLJ4 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L11C9JVI0 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 KLRF2D3W0D1 207 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L18D6R9N7 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L22D6RA61 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L17D6RBQ6 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L19D6RCP7 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L20D6RJB6 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 DHX16O60231 1041 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 ADD1P35611 737 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 USP17L24Q0WX57 530 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 ST3GAL1Q11201 340 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 BTNL9Q6UXG8 535 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 TMTC3Q6ZXV5 915 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 NECAB1Q8N987 351 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 GPCPD1Q9NPB8 672 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 FEM1BQ9UK73 627 aa23.06■■□□□ 1.28
PDLIM2-221ENST00000622702 SMARCA1P28370 1054 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 TTBK2Q6IQ55 1244 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 CATSPERGQ6ZRH7 1159 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 P2RX7Q99572 595 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 TMEM232C9JQI7 657 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 PLEKHA8P1O95397 391 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 ANP32AP39687 249 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 STAT2P52630 851 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 NTRK3Q16288 839 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 FAM160B2Q86V87 743 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 CD99L2Q8TCZ2 262 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 CHURC1Q8WUH1 139 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 ERO1AQ96HE7 468 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 TANGO6Q9C0B7 1094 aa23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 ISY1Q9ULR0 285 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-221ENST00000622702 BCRP11274 1271 aa23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 FUT2Q10981 343 aa23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 CUL4AQ13619 759 aa23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 CPLX2Q6PUV4 134 aaKnown RBP23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 CCDC83Q8IWF9 413 aa23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 SRBD1Q8N5C6 995 aaKnown RBP23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 SPZ1Q9BXG8 430 aa23.04■■□□□ 1.28
PDLIM2-221ENST00000622702 CPLX1O14810 134 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 IFNAR1P17181 557 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 GCLCP48506 637 aaPredicted RBP23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 HERVK_113P62684 666 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 BECN1Q14457 450 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 SLC35G1Q2M3R5 365 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 NBPF11Q86T75 865 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 SLF1Q9BQI6 1058 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 RIOX1Q9H6W3 641 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 FBXO28Q9NVF7 368 aa23.03■■□□□ 1.28
PDLIM2-221ENST00000622702 MYPNQ86TC9 1320 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 FLOT1O75955 427 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 SLC16A2P36021 539 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 SYDE2Q5VT97 1194 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 ANKRD13CQ8N6S4 541 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 UBA5Q9GZZ9 404 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 PPP1R9AQ9ULJ8 1098 aa23.02■■□□□ 1.28
PDLIM2-221ENST00000622702 CYTH3O43739 400 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 CDKL5O76039 1030 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 ECM2O94769 699 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 CTDNEP1O95476 244 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 LACTBP83111 547 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 IKQ13123 557 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 COG2Q14746 738 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 CTU1Q7Z7A3 348 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 PRPF38AQ8NAV1 312 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 CPVLQ9H3G5 476 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 PRR12Q9ULL5 1215 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 CNTNAP5Q8WYK1 1306 aa23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 BAZ2BQ9UIF8 2168 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-221ENST00000622702 RLFQ13129 1914 aa23■■□□□ 1.27
PDLIM2-221ENST00000622702 CAP1Q01518 475 aa23■■□□□ 1.27
PDLIM2-221ENST00000622702 KIF22Q14807 665 aa23■■□□□ 1.27
PDLIM2-221ENST00000622702 ADGRF4Q8IZF3 695 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms