RNA–Protein interactions for RNA: ENST00000622308.4

SPPL2B-214, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best)

Gene SPPL2B, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-214ENST00000622308 MSL3Q8N5Y2 521 aaKnown RBP20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 TOX2Q96NM4 488 aa20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 SLF1Q9BQI6 1058 aa20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 TEX13BQ9BXU2 312 aa20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 TMEM39AQ9NV64 488 aa20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 ARPP21Q9UBL0 812 aaPredicted RBP20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 CNPY2Q9Y2B0 182 aa20.59■□□□□ 0.89
SPPL2B-214ENST00000622308 SYNGAP1Q96PV0 1343 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 TMEM265A0A087WTH1 108 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 MYADML2A6NDP7 307 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 GSG1L2A8MUP6 293 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 F5H6K3 240 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 NDUFB10O96000 172 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 FPGSQ05932 587 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 KLRC3Q07444 240 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 SNRNP48Q6IEG0 339 aaKnown RBP20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 MIER1Q8N108 512 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 FGD4Q96M96 766 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 STARD7Q9NQZ5 370 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 NYAP2Q9P242 653 aa20.58■□□□□ 0.89
SPPL2B-214ENST00000622308 SMCHD1A6NHR9 2005 aa20.58■□□□□ 0.88
SPPL2B-214ENST00000622308 BAZ2AQ9UIF9 1905 aaKnown RBP20.57■□□□□ 0.88
SPPL2B-214ENST00000622308 ADCY6O43306 1168 aa20.57■□□□□ 0.88
SPPL2B-214ENST00000622308 FOSL2P15408 326 aa20.57■□□□□ 0.88
SPPL2B-214ENST00000622308 KCNA10Q16322 511 aa20.57■□□□□ 0.88
SPPL2B-214ENST00000622308 TBX21Q9UL17 535 aa20.57■□□□□ 0.88
SPPL2B-214ENST00000622308 FAM184BQ9ULE4 1060 aa20.57■□□□□ 0.88
SPPL2B-214ENST00000622308 IGKV6D-41A0A0C4DH26 115 aa20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 MOXD2PA6NHM9 499 aa20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 ATP2A1O14983 1001 aa20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 GRIN2CQ14957 1233 aa20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 ZSCAN25Q6NSZ9 544 aa20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.56■□□□□ 0.886e-8■■□□□ 11.4
SPPL2B-214ENST00000622308 STK11IPQ8N1F8 1099 aa20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 ZHX1Q9UKY1 873 aaPredicted RBP20.56■□□□□ 0.88
SPPL2B-214ENST00000622308 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 DCDC2CA8MYV0 355 aa20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 DUSP11O75319 330 aaKnown RBP20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 CDK7P50613 346 aa20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 C16orf59Q7L2K0 433 aa20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 ZNF467Q7Z7K2 595 aaPredicted RBP20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 PRPF38AQ8NAV1 312 aaKnown RBP20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 NUP133Q8WUM0 1156 aa20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 OSBP2Q969R2 916 aa20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 DDX11Q96FC9 970 aa20.55■□□□□ 0.88
SPPL2B-214ENST00000622308 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 TIMP1P01033 207 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 DNAJB2P25686 324 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 CST5P28325 142 aaPredicted RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 ACVR2BQ13705 512 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 CPXCR1Q8N123 301 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.54■□□□□ 0.884e-9■■□□□ 14.1
SPPL2B-214ENST00000622308 LRRCC1Q9C099 1032 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 MKNK2Q9HBH9 465 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 SLC38A10Q9HBR0 1119 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 RAVER2Q9HCJ3 691 aaKnown RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 EPB41L4AQ9HCS5 686 aaPredicted RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 CLIP2Q9UDT6 1046 aa20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 ZNFX1Q9P2E3 1918 aaKnown RBP20.54■□□□□ 0.88
SPPL2B-214ENST00000622308 ELP1O95163 1332 aa20.53■□□□□ 0.88
SPPL2B-214ENST00000622308 GREB1LQ9C091 1923 aaPredicted RBP20.53■□□□□ 0.88
SPPL2B-214ENST00000622308 MINDY4BA8MYZ0 360 aa20.53■□□□□ 0.88
SPPL2B-214ENST00000622308 USP38Q8NB14 1042 aa20.53■□□□□ 0.88
SPPL2B-214ENST00000622308 MKL1Q969V6 931 aa20.53■□□□□ 0.88
SPPL2B-214ENST00000622308 KATNBL1Q9H079 304 aa20.53■□□□□ 0.88
SPPL2B-214ENST00000622308 MUC3AQ02505 3323 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 CTAGE5O15320 804 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 ZBED4O75132 1171 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 ASGR1P07306 291 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 SLC4A3P48751 1232 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 MFSD5Q6N075 450 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 UPF3AQ9H1J1 476 aaKnown RBP20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.88
SPPL2B-214ENST00000622308 TTC28Q96AY4 2481 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 MYH8P13535 1937 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 PRDM1O75626 825 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 C6orf222P0C671 652 aaPredicted RBP20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 GJA9P57773 515 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 CCDC144BQ3MJ40 725 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 TMEM240Q5SV17 173 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 RASIP1Q5U651 963 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 KIFC2Q96AC6 838 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 CEP95Q96GE4 821 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 GLT1D1Q96MS3 346 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 ABHD16BQ9H3Z7 469 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 ZNF576Q9H609 170 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 MTMR4Q9NYA4 1195 aa20.51■□□□□ 0.87
SPPL2B-214ENST00000622308 ARMCX2Q7L311 632 aa20.5■□□□□ 0.87
SPPL2B-214ENST00000622308 ANKRD35Q8N283 1001 aa20.5■□□□□ 0.87
SPPL2B-214ENST00000622308 APPBP2Q92624 585 aa20.5■□□□□ 0.87
SPPL2B-214ENST00000622308 PLXNA1Q9UIW2 1896 aa20.5■□□□□ 0.87
SPPL2B-214ENST00000622308 GRXCR1A8MXD5 290 aa20.49■□□□□ 0.87
SPPL2B-214ENST00000622308 ARVCFO00192 962 aa20.49■□□□□ 0.87
SPPL2B-214ENST00000622308 RNF113AO15541 343 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms