RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SLC38A10Q9HBR0 1119 aa16.76■□□□□ 0.27
CBWD3-217ENST00000621474 PRR12Q9ULL5 1215 aa16.76■□□□□ 0.27
CBWD3-217ENST00000621474 MYH6P13533 1939 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 HMGB1P09429 215 aaKnown RBP16.75■□□□□ 0.27
CBWD3-217ENST00000621474 CTU1Q7Z7A3 348 aaKnown RBP16.75■□□□□ 0.27
CBWD3-217ENST00000621474 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
CBWD3-217ENST00000621474 CPVLQ9H3G5 476 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 GPCPD1Q9NPB8 672 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 MAD2L2Q9UI95 211 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
CBWD3-217ENST00000621474 ZNF536O15090 1300 aa16.75■□□□□ 0.27
CBWD3-217ENST00000621474 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
CBWD3-217ENST00000621474 RPS6KB1P23443 525 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 GPATCH4Q5T3I0 446 aaKnown RBP16.74■□□□□ 0.27
CBWD3-217ENST00000621474 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 ZNF654Q8IZM8 581 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 CHURC1Q8WUH1 139 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 AGXT2Q9BYV1 514 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 ISY1Q9ULR0 285 aaKnown RBP16.74■□□□□ 0.27
CBWD3-217ENST00000621474 ATP2A1O14983 1001 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 FCGRTP55899 365 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 ASPRV1Q53RT3 343 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 TM6SF1Q9BZW5 370 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
CBWD3-217ENST00000621474 ZNF236Q9UL36 1845 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-217ENST00000621474 PARP1P09874 1014 aaKnown RBP16.73■□□□□ 0.27
CBWD3-217ENST00000621474 ANAPC15P60006 121 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 SNAP25P60880 206 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 IKQ13123 557 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-217ENST00000621474 KIF22Q14807 665 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 GRM4Q14833 912 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 GPR142Q7Z601 462 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
CBWD3-217ENST00000621474 UBA5Q9GZZ9 404 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
CBWD3-217ENST00000621474 GJD2Q9UKL4 321 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 GABRQQ9UN88 632 aa16.73■□□□□ 0.27
CBWD3-217ENST00000621474 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
CBWD3-217ENST00000621474 DDAH1O94760 285 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-217ENST00000621474 GNRH1P01148 92 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 ERCC3P19447 782 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 PSMA5P28066 241 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 PRKCZQ05513 592 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 PLS1Q14651 629 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 SYDE2Q5VT97 1194 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 Q6ZUG5 572 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 RIOX2Q8IUF8 465 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 RAVER2Q9HCJ3 691 aaKnown RBP16.72■□□□□ 0.27
CBWD3-217ENST00000621474 SRRDQ9UH36 339 aa16.72■□□□□ 0.27
CBWD3-217ENST00000621474 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
CBWD3-217ENST00000621474 TAL1P17542 331 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-217ENST00000621474 RXRAP19793 462 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 MAPK4P31152 587 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 STAT3P40763 770 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 CCNA1P78396 465 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 APOA5Q6Q788 366 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 CATIPQ7Z7H3 387 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 CPXCR1Q8N123 301 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 SHCBP1Q8NEM2 672 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 TEX13BQ9BXU2 312 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 MCOLN1Q9GZU1 580 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
CBWD3-217ENST00000621474 CCDC69A6NI79 296 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 CYTH3O43739 400 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 FDX1P10109 184 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 OAZ1P54368 228 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-217ENST00000621474 SNRNP48Q6IEG0 339 aaKnown RBP16.7■□□□□ 0.26
CBWD3-217ENST00000621474 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 RAB11FIP4Q86YS3 637 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 MAP3K14Q99558 947 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 PLXNA1Q9UIW2 1896 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 LCTP09848 1927 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 KLRF2D3W0D1 207 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 ZBED4O75132 1171 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 FLT3LGP49771 235 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 MORN1Q5T089 497 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 NUP133Q8WUM0 1156 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 USP6NLQ92738 828 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 BRF1Q92994 677 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 AGBL1Q96MI9 1066 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 KIF2CQ99661 725 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms