RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PLS1Q14651 629 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 CCAR1Q8IX12 1150 aaKnown RBP21.71■■□□□ 1.07
CIRBP-245ENST00000621399 TM6SF1Q9BZW5 370 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 ARHGAP39Q9C0H5 1083 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 ZSWIM6Q9HCJ5 1215 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 FCGRTP55899 365 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 CCNA1P78396 465 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 TMEM132BQ14DG7 1078 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 ASPRV1Q53RT3 343 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 RUFY3Q7L099 469 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 NUP133Q8WUM0 1156 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 EFCC1Q9HA90 598 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 PRR12Q9ULL5 1215 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 SLC12A7Q9Y666 1083 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 CYP46A1Q9Y6A2 500 aa21.7■■□□□ 1.06
CIRBP-245ENST00000621399 FDX1P10109 184 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 CTGFP29279 349 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 TROAPQ12815 778 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 SYDE2Q5VT97 1194 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 BTNL9Q6UXG8 535 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 ZNF654Q8IZM8 581 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 TRIM47Q96LD4 638 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 SPATC1LQ9H0A9 340 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 SLC38A10Q9HBR0 1119 aa21.69■■□□□ 1.06
CIRBP-245ENST00000621399 TNPO2O14787 897 aaKnown RBP21.68■■□□□ 1.06
CIRBP-245ENST00000621399 DDAH1O94760 285 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 CAP1Q01518 475 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 GRM4Q14833 912 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 SYNE3Q6ZMZ3 975 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 Q6ZUG5 572 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 CTU1Q7Z7A3 348 aaKnown RBP21.68■■□□□ 1.06
CIRBP-245ENST00000621399 SGMS1Q86VZ5 419 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 REPS2Q8NFH8 660 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 MYL10Q9BUA6 226 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 MOV10L1Q9BXT6 1211 aaKnown RBP21.68■■□□□ 1.06
CIRBP-245ENST00000621399 UPF3BQ9BZI7 483 aaKnown RBP21.68■■□□□ 1.06
CIRBP-245ENST00000621399 UBA5Q9GZZ9 404 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 CWC22Q9HCG8 908 aaKnown RBP21.68■■□□□ 1.06
CIRBP-245ENST00000621399 TRIM17Q9Y577 477 aa21.68■■□□□ 1.06
CIRBP-245ENST00000621399 MAPK4P31152 587 aa21.67■■□□□ 1.06
CIRBP-245ENST00000621399 STAT3P40763 770 aa21.67■■□□□ 1.06
CIRBP-245ENST00000621399 OTOP1Q7RTM1 612 aa21.67■■□□□ 1.06
CIRBP-245ENST00000621399 CPXCR1Q8N123 301 aa21.67■■□□□ 1.06
CIRBP-245ENST00000621399 PORCNQ9H237 461 aa21.67■■□□□ 1.06
CIRBP-245ENST00000621399 UPF2Q9HAU5 1272 aaKnown RBP21.67■■□□□ 1.06
CIRBP-245ENST00000621399 MAD2L2Q9UI95 211 aa21.67■■□□□ 1.06
CIRBP-245ENST00000621399 ZNF214Q9UL59 606 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-245ENST00000621399 PALM3A6NDB9 673 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-245ENST00000621399 KLRF2D3W0D1 207 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 GNRH1P01148 92 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 CALM1P0DP23 149 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 CALM2P0DP24 149 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 CALM3P0DP25 149 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 HOXD10P28358 340 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 SNAP25P60880 206 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 WDR78Q5VTH9 848 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 STAG2Q8N3U4 1231 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 CTCFLQ8NI51 663 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-245ENST00000621399 BRF1Q92994 677 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 COA7Q96BR5 231 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 MAP3K14Q99558 947 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 TEX13BQ9BXU2 312 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 C22orf23Q9BZE7 217 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 CPVLQ9H3G5 476 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 RAVER2Q9HCJ3 691 aaKnown RBP21.66■■□□□ 1.06
CIRBP-245ENST00000621399 BRPF3Q9ULD4 1205 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 CASP8AP2Q9UKL3 1982 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 RLFQ13129 1914 aa21.66■■□□□ 1.06
CIRBP-245ENST00000621399 DHX16O60231 1041 aaKnown RBP21.65■■□□□ 1.06
CIRBP-245ENST00000621399 KIF5BP33176 963 aa21.65■■□□□ 1.06
CIRBP-245ENST00000621399 OAZ1P54368 228 aa21.65■■□□□ 1.06
CIRBP-245ENST00000621399 CCDC174Q6PII3 467 aa21.65■■□□□ 1.06
CIRBP-245ENST00000621399 NCAPG2Q86XI2 1143 aa21.65■■□□□ 1.06
CIRBP-245ENST00000621399 RAB11FIP4Q86YS3 637 aa21.65■■□□□ 1.06
CIRBP-245ENST00000621399 PDRG1Q9NUG6 133 aa21.65■■□□□ 1.06
CIRBP-245ENST00000621399 NAP1L2Q9ULW6 460 aaPredicted RBP21.65■■□□□ 1.06
CIRBP-245ENST00000621399 KLF18A0A0U1RQI7 1052 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 ATP2A1O14983 1001 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 SLC25A27O95847 323 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 ERCC3P19447 782 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 RXRAP19793 462 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 SNRNP48Q6IEG0 339 aaKnown RBP21.64■■□□□ 1.05
CIRBP-245ENST00000621399 APOA5Q6Q788 366 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 PLEKHH3Q7Z736 793 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 MICU3Q86XE3 530 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 RIOX2Q8IUF8 465 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 CCDC144CPQ8IYA2 1237 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 ADGRF4Q8IZF3 695 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 FBXL16Q8N461 479 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 SHCBP1Q8NEM2 672 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 IL17RAQ96F46 866 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 RANBP17Q9H2T7 1088 aaKnown RBP21.64■■□□□ 1.05
CIRBP-245ENST00000621399 MROH8Q9H579 483 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
CIRBP-245ENST00000621399 ZBTB43O43298 467 aa21.63■■□□□ 1.05
CIRBP-245ENST00000621399 APOBRQ0VD83 1088 aa21.63■■□□□ 1.05
CIRBP-245ENST00000621399 GPR142Q7Z601 462 aa21.63■■□□□ 1.05
CIRBP-245ENST00000621399 FANCBQ8NB91 859 aa21.63■■□□□ 1.05
CIRBP-245ENST00000621399 COPB2P35606 906 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms