RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 CDC27P30260 824 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 STAT2P52630 851 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 EVCP57679 992 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 HERVK_113P62684 666 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 JMYQ8N9B5 988 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 FANCBQ8NB91 859 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 ZCCHC17Q9NP64 241 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PNMA3Q9UL41 463 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PPP1R9AQ9ULJ8 1098 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CALM1P0DP23 149 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CALM2P0DP24 149 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CALM3P0DP25 149 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 ADD1P35611 737 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 MAP2K1Q02750 393 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 RTN1Q16799 776 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 FAM160B2Q86V87 743 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 ANKRD13CQ8N6S4 541 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CASP8AP2Q9UKL3 1982 aa12.74□□□□□ -0.37
POLR2J3-221ENST00000621093 CYTH3O43739 400 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 TLR2O60603 784 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 PLA2G6O60733 806 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 METAP2P50579 478 aaKnown RBP eCLIP12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 ME3Q16798 604 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 Q3C1V9 767 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 C17orf99Q6UX52 265 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 ADGRF4Q8IZF3 695 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 PRPF38AQ8NAV1 312 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 RBBP6Q7Z6E9 1792 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-221ENST00000621093 NID2Q14112 1375 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 VWA5AO00534 786 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 BCRP11274 1271 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 KIF5BP33176 963 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 ST3GAL1Q11201 340 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 SCRN1Q12765 414 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 TMEM132BQ14DG7 1078 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 TMTC3Q6ZXV5 915 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 JMJD4Q9H9V9 463 aa12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 RAVER2Q9HCJ3 691 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-221ENST00000621093 ZNF536O15090 1300 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 CNTNAP5Q8WYK1 1306 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 DHX16O60231 1041 aaKnown RBP12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 ST18O60284 1047 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 PFKFB2O60825 505 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 ZBED4O75132 1171 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 GCLCP48506 637 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 SLC4A3P48751 1232 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 CAP1Q01518 475 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 FUT2Q10981 343 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 PLS1Q14651 629 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 CDC37Q16543 378 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 PIGSQ96S52 555 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 CFHR5Q9BXR6 569 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 SLKQ9H2G2 1235 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 RANBP17Q9H2T7 1088 aaKnown RBP12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 RIOX1Q9H6W3 641 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 RBM28Q9NW13 759 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms