RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 IFIT3O14879 490 aaKnown RBP8.26□□□□□ -1.09
PSMB3-212ENST00000620309 WDR46O15213 610 aaKnown RBP8.26□□□□□ -1.09
PSMB3-212ENST00000620309 DDAH1O94760 285 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 TTLL1O95922 423 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 PRMT2P55345 433 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 FCGRTP55899 365 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 CCNA1P78396 465 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 WTAPQ15007 396 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 ANKRD1Q15327 319 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 SLC9C1Q4G0N8 1177 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 IFIT1BQ5T764 474 aaKnown RBP8.26□□□□□ -1.09
PSMB3-212ENST00000620309 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
PSMB3-212ENST00000620309 DGKHQ86XP1 1220 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 ZNF654Q8IZM8 581 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
PSMB3-212ENST00000620309 C12orf42Q96LP6 360 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 BRPF3Q9ULD4 1205 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 TPCN1Q9ULQ1 816 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 STX8Q9UNK0 236 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
PSMB3-212ENST00000620309 ZNF236Q9UL36 1845 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 MYPNQ86TC9 1320 aa8.26□□□□□ -1.09
PSMB3-212ENST00000620309 KLF18A0A0U1RQI7 1052 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 A0A1W2PRG0 241 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 ERICH2A1L162 156 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
PSMB3-212ENST00000620309 SNHG28P0DPA3 235 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 TOP1P11387 765 aaKnown RBP8.25□□□□□ -1.09
PSMB3-212ENST00000620309 EEF2P13639 858 aaKnown RBP8.25□□□□□ -1.09
PSMB3-212ENST00000620309 VCAM1P19320 739 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 MCM2P49736 904 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 APOBRQ0VD83 1088 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 TROAPQ12815 778 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 FAM110CQ1W6H9 321 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 NBPF11Q86T75 865 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 MICU3Q86XE3 530 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 SIAH1Q8IUQ4 282 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 PNMA1Q8ND90 353 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 GMCL1P1Q8NEA9 526 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 GTF3C6Q969F1 213 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 COA7Q96BR5 231 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 TMEM47Q9BQJ4 181 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 VCPKMTQ9H867 229 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 STXBP5LQ9Y2K9 1186 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 TMX2Q9Y320 296 aa8.25□□□□□ -1.09
PSMB3-212ENST00000620309 FMNL1O95466 1100 aaPredicted RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 CYP2C8P10632 490 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 PDHBP11177 359 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 HOXA7P31268 230 aaPredicted RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 COPB2P35606 906 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 ANP32AP39687 249 aaKnown RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 LACTBP83111 547 aaPredicted RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 IKQ13123 557 aaPredicted RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 ME3Q16798 604 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 TREML2Q5T2D2 321 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 NOL8Q76FK4 1167 aaKnown RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 HSCBQ8IWL3 235 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 MB21D1Q8N884 522 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 MKL1Q969V6 931 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 TMX3Q96JJ7 454 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 MYL10Q9BUA6 226 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 ASCC2Q9H1I8 757 aaPredicted RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 RPAP3Q9H6T3 665 aaPredicted RBP8.24□□□□□ -1.09
PSMB3-212ENST00000620309 KAT14Q9H8E8 782 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 HOXC10Q9NYD6 342 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 CPA4Q9UI42 421 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 LIMCH1Q9UPQ0 1083 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 CNTNAP5Q8WYK1 1306 aa8.24□□□□□ -1.09
PSMB3-212ENST00000620309 ZNFX1Q9P2E3 1918 aaKnown RBP8.23□□□□□ -1.09
PSMB3-212ENST00000620309 CCDC69A6NI79 296 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 TNPO2O14787 897 aaKnown RBP8.23□□□□□ -1.09
PSMB3-212ENST00000620309 ZBTB43O43298 467 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 PFKFB2O60825 505 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 FLOT1O75955 427 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 RXRAP19793 462 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 PDIA3P30101 505 aaKnown RBP8.23□□□□□ -1.09
PSMB3-212ENST00000620309 HERVK_113P62684 666 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 FGD1P98174 961 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 SCRN1Q12765 414 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 CUL4AQ13619 759 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 GRM4Q14833 912 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 KIAA1755Q5JYT7 1200 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 GPAT2Q6NUI2 795 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 RAB11FIP4Q86YS3 637 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 TMTC2Q8N394 836 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 ANKRD13CQ8N6S4 541 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 ACER1Q8TDN7 264 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 SH3TC2Q8TF17 1288 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 ZNF274Q96GC6 653 aaPredicted RBP8.23□□□□□ -1.09
PSMB3-212ENST00000620309 GMCL1Q96IK5 515 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 MAP3K14Q99558 947 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
PSMB3-212ENST00000620309 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 SH2B1Q9NRF2 756 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms