RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 SNRNP48Q6IEG0 339 aaKnown RBP13.31□□□□□ -0.28
TARDBP-221ENST00000619555 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
TARDBP-221ENST00000619555 MKL1Q969V6 931 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 CEP95Q96GE4 821 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 TEX13BQ9BXU2 312 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
TARDBP-221ENST00000619555 ERC2O15083 957 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 PGK1P00558 417 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 ZNF865P0CJ78 1059 aaPredicted RBP13.3□□□□□ -0.28
TARDBP-221ENST00000619555 LRRFIP1Q32MZ4 808 aaKnown RBP13.3□□□□□ -0.28
TARDBP-221ENST00000619555 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
TARDBP-221ENST00000619555 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 RAVER2Q9HCJ3 691 aaKnown RBP13.3□□□□□ -0.28
TARDBP-221ENST00000619555 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 PRKAG2Q9UGJ0 569 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
TARDBP-221ENST00000619555 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
TARDBP-221ENST00000619555 ZBED4O75132 1171 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 TTLL1O95922 423 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 RARBP10826 455 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 TFAP4Q01664 338 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 SNX17Q15036 470 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 CCDC129Q6ZRS4 1044 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 SH3RF1Q7Z6J0 888 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 LENG1Q96BZ8 264 aaPredicted RBP13.29□□□□□ -0.28
TARDBP-221ENST00000619555 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 PRDM5Q9NQX1 630 aaPredicted RBP13.29□□□□□ -0.28
TARDBP-221ENST00000619555 PHF24Q9UPV7 400 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 A0A0C4DFX4 3053 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 MCM3APO60318 1980 aa13.29□□□□□ -0.28
TARDBP-221ENST00000619555 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-221ENST00000619555 TSPY3P0CV98 308 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 TSPY8P0CW00 308 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 MX1P20591 662 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 TLE2Q04725 743 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 PPARAQ07869 468 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 SLC17A8Q8NDX2 589 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 NAPBQ9H115 298 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 FEM1BQ9UK73 627 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
TARDBP-221ENST00000619555 CTDP1Q9Y5B0 961 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-221ENST00000619555 LTBP2Q14767 1821 aa13.27□□□□□ -0.28
TARDBP-221ENST00000619555 DNAJC25-GNG10A0A024R161 153 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 FOXP2O15409 715 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
TARDBP-221ENST00000619555 BMP3P12645 472 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 AKR1A1P14550 325 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 PDE4BQ07343 736 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 ANKRD45Q5TZF3 282 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 RNF180Q86T96 592 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 GMCL1P1Q8NEA9 526 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 BADQ92934 168 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 TRIM43Q96BQ3 446 aaPredicted RBP13.27□□□□□ -0.29
TARDBP-221ENST00000619555 PDLIM7Q9NR12 457 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
TARDBP-221ENST00000619555 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 ADAMTS4O75173 837 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-221ENST00000619555 CTDSPL2Q05D32 466 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-221ENST00000619555 SHHQ15465 462 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 C1orf53Q5VUE5 145 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 MAMDC4Q6UXC1 1216 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 ANKRD35Q8N283 1001 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
TARDBP-221ENST00000619555 FGD4Q96M96 766 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 PLIN4Q96Q06 1357 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-221ENST00000619555 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
TARDBP-221ENST00000619555 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
TARDBP-221ENST00000619555 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
TARDBP-221ENST00000619555 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 IGHDP01880 384 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 MCCP23508 829 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 ITGB8P26012 769 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
TARDBP-221ENST00000619555 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 CHST13Q8NET6 341 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
TARDBP-221ENST00000619555 FAM184BQ9ULE4 1060 aa13.25□□□□□ -0.29
TARDBP-221ENST00000619555 STXBP5LQ9Y2K9 1186 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms