RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 WDR46O15213 610 aaKnown RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 DDAH1O94760 285 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 BMP3P12645 472 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 KIF5BP33176 963 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 IRX3P78415 501 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 FOXD4L5Q5VV16 416 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 SGMS1Q86VZ5 419 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 RNF214Q8ND24 703 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 MYRIPQ8NFW9 859 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 CTCFLQ8NI51 663 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 FOXD4L4Q8WXT5 416 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 CHAMP1Q96JM3 812 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 KLF18A0A0U1RQI7 1052 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 ZBTB43O43298 467 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 STX6O43752 255 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 ALDH1A1P00352 501 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 FAM83BQ5T0W9 1011 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 GPATCH4Q5T3I0 446 aaKnown RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 ANKRD23Q86SG2 305 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 ZNF654Q8IZM8 581 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 PKNOX2Q96KN3 472 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 ALDH8A1Q9H2A2 487 aaPredicted RBP12.18□□□□□ -0.46
NBPF3-213ENST00000619554 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 CEP350Q5VT06 3117 aa12.18□□□□□ -0.46
NBPF3-213ENST00000619554 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 PDHXO00330 501 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 FLOT1O75955 427 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 F13A1P00488 732 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 PDHBP11177 359 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 TM4SF4P48230 202 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 APOBRQ0VD83 1088 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 DGKZQ13574 1117 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 TREML2Q5T2D2 321 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
NBPF3-213ENST00000619554 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 CHURC1Q8WUH1 139 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
NBPF3-213ENST00000619554 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 SENP2Q9HC62 589 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 FEM1BQ9UK73 627 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
NBPF3-213ENST00000619554 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
NBPF3-213ENST00000619554 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 TMEM232C9JQI7 657 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 SYT1P21579 422 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 GNAQP50148 359 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 AK2P54819 239 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 COG2Q14746 738 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 MICU3Q86XE3 530 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 PARK7Q99497 189 aaKnown RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 MAP3K14Q99558 947 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 AGXT2Q9BYV1 514 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 FAM13BQ9NYF5 915 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 METAP2P50579 478 aaKnown RBP eCLIP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 STAT2P52630 851 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 RCAN1P53805 252 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 MAP2K1Q02750 393 aaPredicted RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 ZNF543Q08ER8 600 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 TOB2Q14106 344 aaPredicted RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 NOLC1Q14978 699 aaKnown RBP eCLIP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
NBPF3-213ENST00000619554 FAM160B2Q86V87 743 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 FANCBQ8NB91 859 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 PTPN18Q99952 460 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 MYL10Q9BUA6 226 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 USP25Q9UHP3 1055 aa12.16□□□□□ -0.46
NBPF3-213ENST00000619554 FRMPD2Q68DX3 1309 aaPredicted RBP12.15□□□□□ -0.46
NBPF3-213ENST00000619554 GOLGA8AA7E2F4 631 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms