RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 TSGA10IPQ3SY00 556 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 RIOX2Q8IUF8 465 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 FAM43AQ8N2R8 423 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 ZNF280CQ8ND82 737 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 ZIC5Q96T25 663 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 KCNQ5Q9NR82 932 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 NYAP2Q9P242 653 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 ASTN2O75129 1339 aaPredicted RBP6.6□□□□□ -1.35
CBWD3-215ENST00000619322 NKRFO15226 690 aaKnown RBP eCLIP6.6□□□□□ -1.35
CBWD3-215ENST00000619322 GNAT2P19087 354 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 RGS2P41220 211 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 CDK7P50613 346 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 BACE1P56817 501 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 ATP2B3Q16720 1220 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 NBPF12Q5TAG4 269 aaPredicted RBP6.6□□□□□ -1.35
CBWD3-215ENST00000619322 C16orf86Q6ZW13 317 aa6.6□□□□□ -1.35
CBWD3-215ENST00000619322 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 LDHBP07195 334 aaKnown RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 KLRK1P26718 216 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 GRK4P32298 578 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 RAB15P59190 212 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 GTF2IP78347 998 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 SH3RF1Q7Z6J0 888 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 ZNF526Q8TF50 670 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 GMCL1Q96IK5 515 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 KATNBL1Q9H079 304 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 TTF2Q9UNY4 1162 aaKnown RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L15C9J2P7 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L13C9JLJ4 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L11C9JVI0 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L18D6R9N7 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L22D6RA61 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L17D6RBQ6 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L19D6RCP7 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L20D6RJB6 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 ZFYP08048 801 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 NR3C2P08235 984 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 ATP5JP18859 108 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 USP17L24Q0WX57 530 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 CWF19L2Q2TBE0 894 aaKnown RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 CCDC174Q6PII3 467 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 FKBPLQ9UIM3 349 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 ANGEL1Q9UNK9 670 aaKnown RBP6.59□□□□□ -1.35
CBWD3-215ENST00000619322 NR2E3Q9Y5X4 410 aa6.59□□□□□ -1.35
CBWD3-215ENST00000619322 FLT1P17948 1338 aa6.59□□□□□ -1.36
CBWD3-215ENST00000619322 NPHP1O15259 732 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 CCNA1P78396 465 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 KRT24Q2M2I5 525 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 ZNF792Q3KQV3 632 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 CCDC102BQ68D86 513 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 PHOSPHO2Q8TCD6 241 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 STAP2Q9UGK3 403 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 PDHXO00330 501 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 STAU1O95793 577 aaKnown RBP6.58□□□□□ -1.36
CBWD3-215ENST00000619322 BAG3O95817 575 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 CCL5P13501 91 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 CCDC178Q5BJE1 867 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 MICALL1Q8N3F8 863 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 OSBPL3Q9H4L5 887 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 SMC4Q9NTJ3 1288 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 DACH1Q9UI36 760 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 TMX2Q9Y320 296 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 PTCH2Q9Y6C5 1203 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 ATP5J2-PTCD1G3V325 749 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 EIF2S2P20042 333 aaKnown RBP6.58□□□□□ -1.36
CBWD3-215ENST00000619322 FKBP5Q13451 457 aaPredicted RBP6.58□□□□□ -1.36
CBWD3-215ENST00000619322 ARID5BQ14865 1188 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 SSH1Q8WYL5 1049 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 C11orf49Q9H6J7 331 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 RCAN3Q9UKA8 241 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 SQORQ9Y6N5 450 aa6.58□□□□□ -1.36
CBWD3-215ENST00000619322 GNAI2P04899 355 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 AGERQ15109 404 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 DHX37Q8IY37 1157 aaKnown RBP6.57□□□□□ -1.36
CBWD3-215ENST00000619322 SPATA5Q8NB90 893 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 CHST13Q8NET6 341 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 SLC5A4Q9NY91 659 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 PIK3CDO00329 1044 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 ST8SIA5O15466 376 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 EDNRBP24530 442 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 TMEM179Q6ZVK1 233 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 ADAM32Q8TC27 787 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 SAMD11Q96NU1 681 aa6.57□□□□□ -1.36
CBWD3-215ENST00000619322 ARPP21Q9UBL0 812 aaPredicted RBP6.57□□□□□ -1.36
CBWD3-215ENST00000619322 UBE2Q2LH0YL09 131 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 CD4P01730 458 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 SNHG28P0DPA3 235 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 RCAN1P53805 252 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 TAF1CQ15572 869 aaPredicted RBP6.56□□□□□ -1.36
CBWD3-215ENST00000619322 TNNI3KQ59H18 835 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 ZSCAN25Q6NSZ9 544 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 CD99L2Q8TCZ2 262 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 KCNN1Q92952 543 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
CBWD3-215ENST00000619322 FPGT-TNNI3KV9GXZ4 949 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms