RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PDE6BP35913 854 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 MED15Q96RN5 788 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 DDX60LQ5H9U9 1706 aaKnown RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 SLC16A2P36021 539 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 MORC3Q14149 939 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 TMED8Q6PL24 325 aaPredicted RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 ANKS1AQ92625 1134 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 MASTLQ96GX5 879 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 TCP11L1Q9NUJ3 509 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 BARHL2Q9NY43 387 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 SEC63Q9UGP8 760 aaKnown RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 DHX8Q14562 1220 aaKnown RBP14.09□□□□□ -0.15
CIITA-212ENST00000618207 CDC42EP5Q6NZY7 148 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
CIITA-212ENST00000618207 ADAMTSL1Q8N6G6 1762 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.16
CIITA-212ENST00000618207 BMP15O95972 392 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 CUL4BQ13620 913 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 CCDC178Q5BJE1 867 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 KANK3Q6NY19 840 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 RRP36Q96EU6 259 aaKnown RBP14.08□□□□□ -0.16
CIITA-212ENST00000618207 SERPINB13Q9UIV8 391 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 CCNT1O60563 726 aaKnown RBP14.08□□□□□ -0.16
CIITA-212ENST00000618207 TTBK2Q6IQ55 1244 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 CCDC148Q8NFR7 591 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 TEKT1Q969V4 418 aa14.08□□□□□ -0.16
CIITA-212ENST00000618207 SOGA3Q5TF21 947 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 MLKLQ8NB16 471 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 CCDC34Q96HJ3 373 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 PDGFDQ9GZP0 370 aaPredicted RBP14.07□□□□□ -0.16
CIITA-212ENST00000618207 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 PLSCR1O15162 318 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 PDHBP11177 359 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 CRKP46108 304 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 AOC3Q16853 763 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 DTHD1Q6ZMT9 781 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 KCTD1Q719H9 257 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 MTRQ99707 1265 aa14.07□□□□□ -0.16
CIITA-212ENST00000618207 STAT6P42226 847 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 GSDMDP57764 484 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 EN1Q05925 392 aaPredicted RBP14.06□□□□□ -0.16
CIITA-212ENST00000618207 APOBEC3HQ6NTF7 200 aaKnown RBP14.06□□□□□ -0.16
CIITA-212ENST00000618207 CERS3Q8IU89 383 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 MYRIPQ8NFW9 859 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 EEF2KMTQ96G04 330 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 PDCL3Q9H2J4 239 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 H0YIN7 160 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 TRAPPC10P48553 1259 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 DPYDQ12882 1025 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 NT5DC1Q5TFE4 455 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 CTNND2Q9UQB3 1225 aa14.06□□□□□ -0.16
CIITA-212ENST00000618207 ADKP55263 362 aaKnown RBP14.05□□□□□ -0.16
CIITA-212ENST00000618207 C4orf32Q8N8J7 132 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 OSBPL5Q9H0X9 879 aaPredicted RBP14.05□□□□□ -0.16
CIITA-212ENST00000618207 SH3GLB2Q9NR46 395 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 UBA7P41226 1012 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 EZH2Q15910 746 aaKnown RBP14.05□□□□□ -0.16
CIITA-212ENST00000618207 TBCKQ8TEA7 893 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 CPLX3Q8WVH0 158 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 DACH1Q9UI36 760 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 GDAQ9Y2T3 454 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 M0R2N6 131 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 CBFA2T2O43439 604 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 ECE2O60344 883 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 NEMFO60524 1076 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 RXRBP28702 533 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 TXLNAP40222 546 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 GABPAQ06546 454 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 PTPN14Q15678 1187 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 E2F4Q16254 413 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
CIITA-212ENST00000618207 PRIMPOLQ96LW4 560 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 SPZ1Q9BXG8 430 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 C6orf50Q9HD87 102 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 IMPACTQ9P2X3 320 aa14.05□□□□□ -0.16
CIITA-212ENST00000618207 DDTLA6NHG4 134 aaPredicted RBP14.04□□□□□ -0.16
CIITA-212ENST00000618207 HLA-DOAP06340 250 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 MYH8P13535 1937 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 SHMT1P34896 483 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 TECP42680 631 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 UBE2SQ16763 222 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 SYNRGQ9UMZ2 1314 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 TEX33O43247 280 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 CCT6AP40227 531 aaKnown RBP14.04□□□□□ -0.16
CIITA-212ENST00000618207 TERF1P54274 439 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
CIITA-212ENST00000618207 CEP135Q66GS9 1140 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 FAM177A1Q8N128 213 aaPredicted RBP14.04□□□□□ -0.16
CIITA-212ENST00000618207 CCAR2Q8N163 923 aaKnown RBP14.04□□□□□ -0.16
CIITA-212ENST00000618207 SPATA20Q8TB22 786 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms