RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 RIOX2Q8IUF8 465 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 VWCEQ96DN2 955 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 CD320Q9NPF0 282 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 COG5Q9UP83 839 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 PCDHA11Q9Y5I1 949 aa11.13□□□□□ -0.63
PSMB3-210ENST00000618159 TLR3O15455 904 aaKnown RBP11.12□□□□□ -0.63
PSMB3-210ENST00000618159 DUSP11O75319 330 aaKnown RBP11.12□□□□□ -0.63
PSMB3-210ENST00000618159 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
PSMB3-210ENST00000618159 SAMD1Q6SPF0 538 aaPredicted RBP11.12□□□□□ -0.63
PSMB3-210ENST00000618159 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
PSMB3-210ENST00000618159 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
PSMB3-210ENST00000618159 VTI1AQ96AJ9 217 aa11.12□□□□□ -0.63
PSMB3-210ENST00000618159 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
PSMB3-210ENST00000618159 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
PSMB3-210ENST00000618159 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
PSMB3-210ENST00000618159 TRIP12Q14669 1992 aaPredicted RBP11.11□□□□□ -0.63
PSMB3-210ENST00000618159 MPHOSPH10O00566 681 aaKnown RBP11.11□□□□□ -0.63
PSMB3-210ENST00000618159 CTAGE5O15320 804 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
PSMB3-210ENST00000618159 IGSF3O75054 1194 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 C6orf222P0C671 652 aaPredicted RBP11.11□□□□□ -0.63
PSMB3-210ENST00000618159 KCTD2Q14681 263 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 MSL3Q8N5Y2 521 aaKnown RBP11.11□□□□□ -0.63
PSMB3-210ENST00000618159 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
PSMB3-210ENST00000618159 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 CERS4Q9HA82 394 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 SMC4Q9NTJ3 1288 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
PSMB3-210ENST00000618159 PRR33A8MZF0 331 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
PSMB3-210ENST00000618159 CCL23P55773 120 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 GJA9P57773 515 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 CCDC158Q5M9N0 1113 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 MAMDC4Q6UXC1 1216 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 REPS2Q8NFH8 660 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 HLA-CQ95604 372 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 ZNF512BQ96KM6 892 aaPredicted RBP11.1□□□□□ -0.63
PSMB3-210ENST00000618159 WNT8AQ9H1J5 351 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 VCPKMTQ9H867 229 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 FBXO28Q9NVF7 368 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 ZHX1Q9UKY1 873 aaPredicted RBP11.1□□□□□ -0.63
PSMB3-210ENST00000618159 ZNF214Q9UL59 606 aaPredicted RBP11.1□□□□□ -0.63
PSMB3-210ENST00000618159 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
PSMB3-210ENST00000618159 TMX2Q9Y320 296 aa11.1□□□□□ -0.63
PSMB3-210ENST00000618159 TANC1Q9C0D5 1861 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 DNAJC25-GNG10A0A024R161 153 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 PNMA6EA0A0J9YXQ4 647 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
PSMB3-210ENST00000618159 ARHGEF15O94989 841 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 POLR3DP05423 398 aaPredicted RBP11.09□□□□□ -0.63
PSMB3-210ENST00000618159 CA3P07451 260 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
PSMB3-210ENST00000618159 STAT3P40763 770 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 NHLH1Q02575 133 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.638e-10■■■■■ 28.8
PSMB3-210ENST00000618159 ACVR2BQ13705 512 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 TNNI3KQ59H18 835 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 GNASQ5JWF2 1037 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 TMEM179Q6ZVK1 233 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 MAGEB6Q8N7X4 407 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
PSMB3-210ENST00000618159 NOC4LQ9BVI4 516 aaKnown RBP11.09□□□□□ -0.63
PSMB3-210ENST00000618159 GPR108Q9NPR9 543 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 FPGT-TNNI3KV9GXZ4 949 aa11.09□□□□□ -0.63
PSMB3-210ENST00000618159 GREB1LQ9C091 1923 aaPredicted RBP11.08□□□□□ -0.64
PSMB3-210ENST00000618159 MYH4Q9Y623 1939 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 VWA5AO00534 786 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 NKX3-2P78367 333 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 TTLL4Q14679 1199 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 CCDC144BQ3MJ40 725 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 TMEM67Q5HYA8 995 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 SPC25Q9HBM1 224 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
PSMB3-210ENST00000618159 USP34Q70CQ2 3546 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
PSMB3-210ENST00000618159 SIP14410 1827 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 B4GALT4O60513 344 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 LPXNO60711 386 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 GNAI3P08754 354 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 COPB2P35606 906 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 BEX3Q00994 111 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 ICA1Q05084 483 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
PSMB3-210ENST00000618159 RPUSD2Q8IZ73 545 aaKnown RBP11.07□□□□□ -0.64
PSMB3-210ENST00000618159 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 SCLYQ96I15 445 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 FGD4Q96M96 766 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
PSMB3-210ENST00000618159 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
PSMB3-210ENST00000618159 PPP1R9AQ9ULJ8 1098 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms