RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 TMEM60Q9H2L4 133 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
CBX5-206ENST00000618078 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 DPEP1P16444 411 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 CDC25AP30304 524 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 AFMP43652 599 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 BAG6P46379 1132 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 HDLBPQ00341 1268 aaKnown RBP17.28■□□□□ 0.36
CBX5-206ENST00000618078 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
CBX5-206ENST00000618078 MRFAP1L1Q96HT8 127 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 IDI2Q9BXS1 227 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 SERPINA10Q9UK55 444 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
CBX5-206ENST00000618078 CDC25BP30305 580 aa17.27■□□□□ 0.36
CBX5-206ENST00000618078 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
CBX5-206ENST00000618078 COA7Q96BR5 231 aa17.27■□□□□ 0.36
CBX5-206ENST00000618078 PRMT6Q96LA8 375 aaPredicted RBP17.27■□□□□ 0.36
CBX5-206ENST00000618078 PSME4Q14997 1843 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 ATP1A3P13637 1013 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 KCNA3P22001 575 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 SARSP49591 514 aaKnown RBP17.27■□□□□ 0.35
CBX5-206ENST00000618078 ARID5BQ14865 1188 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 TTLL6Q8N841 843 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 STAMQ92783 540 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 SMARCE1Q969G3 411 aa17.27■□□□□ 0.35
CBX5-206ENST00000618078 ZNF543Q08ER8 600 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 CC2D2BQ6DHV5 1058 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 GALNT17Q6IS24 598 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 ZNF277Q9NRM2 450 aaPredicted RBP17.26■□□□□ 0.35
CBX5-206ENST00000618078 HOOK1Q9UJC3 728 aaKnown RBP17.26■□□□□ 0.35
CBX5-206ENST00000618078 OFD1O75665 1012 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 RAD17O75943 681 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 SMARCA1P28370 1054 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 SLC16A2P36021 539 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
CBX5-206ENST00000618078 NT5DC1Q5TFE4 455 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 SUPT20HQ8NEM7 779 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 PAGE5Q96GU1 130 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 TMEM260Q9NX78 707 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 IFNKQ9P0W0 207 aa17.26■□□□□ 0.35
CBX5-206ENST00000618078 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 CCDC93Q567U6 631 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
CBX5-206ENST00000618078 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 PP2D1A8MPX8 630 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 IKBKBO14920 756 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 GDF11O95390 407 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 MORC3Q14149 939 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 E2F4Q16254 413 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 DHX36Q9H2U1 1008 aaKnown RBP17.25■□□□□ 0.35
CBX5-206ENST00000618078 JMJD4Q9H9V9 463 aa17.25■□□□□ 0.35
CBX5-206ENST00000618078 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
CBX5-206ENST00000618078 SMTNL1A8MU46 457 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 RAD21O60216 631 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 PPP1R11O60927 126 aaPredicted RBP17.24■□□□□ 0.35
CBX5-206ENST00000618078 SMC2O95347 1197 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 MYL5Q02045 173 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.352e-8■■■■□ 19.6
CBX5-206ENST00000618078 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
CBX5-206ENST00000618078 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
CBX5-206ENST00000618078 CACTINQ8WUQ7 758 aaKnown RBP17.24■□□□□ 0.35
CBX5-206ENST00000618078 C6orf50Q9HD87 102 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 TPM3P06753 285 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
CBX5-206ENST00000618078 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 KANK3Q6NY19 840 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 FILIP1Q7Z7B0 1213 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 ADGRF4Q8IZF3 695 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
CBX5-206ENST00000618078 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
CBX5-206ENST00000618078 JAG1P78504 1218 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 SEPT2Q15019 361 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
CBX5-206ENST00000618078 TRMT44Q8IYL2 757 aaKnown RBP17.23■□□□□ 0.35
CBX5-206ENST00000618078 KIAA1524Q8TCG1 905 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
CBX5-206ENST00000618078 PSMD14O00487 310 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
CBX5-206ENST00000618078 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 MTRQ99707 1265 aa17.23■□□□□ 0.35
CBX5-206ENST00000618078 CLRN2A0PK11 232 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 USP17L10C9JJH3 530 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 GNA11P29992 359 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 RRP1BQ14684 758 aaKnown RBP17.22■□□□□ 0.35
CBX5-206ENST00000618078 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
CBX5-206ENST00000618078 NONOQ15233 471 aaKnown RBP eCLIP17.22■□□□□ 0.35
CBX5-206ENST00000618078 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 KRT25Q7Z3Z0 450 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 DPF2Q92785 391 aa17.22■□□□□ 0.35
CBX5-206ENST00000618078 MED15Q96RN5 788 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms