RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 GREB1LQ9C091 1923 aaPredicted RBP20.01■□□□□ 0.79
CNOT3-209ENST00000617930 ZNF541Q9H0D2 1346 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 STXBP3O00186 592 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 GNAQP50148 359 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 ZNF75DP51815 510 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 TTC38Q5R3I4 469 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 CDAN1Q8IWY9 1227 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 SPC24Q8NBT2 197 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 AGBL3Q8NEM8 1001 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 EPSTI1Q96J88 318 aa20.01■□□□□ 0.79
CNOT3-209ENST00000617930 POLR2DO15514 142 aaKnown RBP20■□□□□ 0.79
CNOT3-209ENST00000617930 BMP6P22004 513 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 BLIDQ8IZY5 108 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 AOPEPQ8N6M6 819 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 JDP2Q8WYK2 163 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 SH3GLB2Q9NR46 395 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 SBF1O95248 1867 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 FZD9O00144 591 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 NLRP12P59046 1061 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 LRRC47Q8N1G4 583 aaKnown RBP20■□□□□ 0.79
CNOT3-209ENST00000617930 SYT17Q9BSW7 474 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 SPZ1Q9BXG8 430 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 UBA5Q9GZZ9 404 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 KCNF1Q9H3M0 494 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 BRMS1Q9HCU9 246 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 BARHL2Q9NY43 387 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 SERTAD1Q9UHV2 236 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 PCDHA4Q9UN74 947 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 SCAF8Q9UPN6 1271 aaKnown RBP20■□□□□ 0.79
CNOT3-209ENST00000617930 CNTNAP1P78357 1384 aa20■□□□□ 0.79
CNOT3-209ENST00000617930 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PRR29P0C7W0 189 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PDHBP11177 359 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PTGDRQ13258 359 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 GRAMD1CQ8IYS0 662 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PDILTQ8N807 584 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 C4orf32Q8N8J7 132 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 CNNM3Q8NE01 707 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 ZNF70Q9UC06 446 aaPredicted RBP19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PCDHA6Q9UN73 950 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 CEP131Q9UPN4 1083 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PCDHA8Q9Y5H6 950 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 PCDHA5Q9Y5H7 936 aa19.99■□□□□ 0.79
CNOT3-209ENST00000617930 ACTN4O43707 911 aaKnown RBP19.98■□□□□ 0.79
CNOT3-209ENST00000617930 ATP2C1P98194 919 aaPredicted RBP19.98■□□□□ 0.79
CNOT3-209ENST00000617930 NCAPHQ15003 741 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 NBPF9Q3BBW0 867 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 CEP57L1Q8IYX8 460 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 MAP7D2Q96T17 732 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 NRBP1Q9UHY1 535 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 FRMPD2Q68DX3 1309 aaPredicted RBP19.98■□□□□ 0.79
CNOT3-209ENST00000617930 TCP10L2B9ZVM9 353 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 C17orf53Q8N3J3 647 aaPredicted RBP19.98■□□□□ 0.79
CNOT3-209ENST00000617930 TRIM5Q9C035 493 aa19.98■□□□□ 0.79
CNOT3-209ENST00000617930 NPM3O75607 178 aaKnown RBP19.97■□□□□ 0.79
CNOT3-209ENST00000617930 SNHG28P0DPA3 235 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.791e-9■■□□□ 12.4
CNOT3-209ENST00000617930 RRP1BQ14684 758 aaKnown RBP19.97■□□□□ 0.79
CNOT3-209ENST00000617930 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 SARM1Q6SZW1 724 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 PIGSQ96S52 555 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 LZTS2Q9BRK4 669 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 HSD3B7Q9H2F3 369 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 VAT1LQ9HCJ6 419 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 CLIP2Q9UDT6 1046 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 DICER1Q9UPY3 1922 aaKnown RBP19.97■□□□□ 0.79
CNOT3-209ENST00000617930 ASTN2O75129 1339 aaPredicted RBP19.97■□□□□ 0.79
CNOT3-209ENST00000617930 ATRNL1Q5VV63 1379 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 WNT10BO00744 389 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 MCM7P33993 719 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 JAG1P78504 1218 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 SPDYE2Q495Y8 402 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 ELOA2Q8IYF1 753 aaPredicted RBP19.97■□□□□ 0.79
CNOT3-209ENST00000617930 MTMR14Q8NCE2 650 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 SYMPKQ92797 1274 aaKnown RBP19.97■□□□□ 0.79
CNOT3-209ENST00000617930 PRIMPOLQ96LW4 560 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 BPIFA3Q9BQP9 254 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 SWAP70Q9UH65 585 aa19.97■□□□□ 0.79
CNOT3-209ENST00000617930 CALML3P27482 149 aa19.96■□□□□ 0.79
CNOT3-209ENST00000617930 GMPSP49915 693 aaPredicted RBP19.96■□□□□ 0.79
CNOT3-209ENST00000617930 HOMER1Q86YM7 354 aa19.96■□□□□ 0.79
CNOT3-209ENST00000617930 DAGLBQ8NCG7 672 aa19.96■□□□□ 0.79
CNOT3-209ENST00000617930 EHD4Q9H223 541 aa19.96■□□□□ 0.79
CNOT3-209ENST00000617930 RIOX1Q9H6W3 641 aa19.96■□□□□ 0.79
CNOT3-209ENST00000617930 SPTLC3Q9NUV7 552 aa19.96■□□□□ 0.79
CNOT3-209ENST00000617930 GOLGA6L19H0YKK7 550 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 TRAPPC10P48553 1259 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 SARSP49591 514 aaKnown RBP19.95■□□□□ 0.78
CNOT3-209ENST00000617930 ARHGAP27Q6ZUM4 889 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 OGFOD1Q8N543 542 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 MYRIPQ8NFW9 859 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 HDAC9Q9UKV0 1011 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 VWA3AA6NCI4 1184 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 BECN2A8MW95 431 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 ENTPD3O75355 529 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 ZNF280AP59817 542 aaPredicted RBP19.95■□□□□ 0.78
CNOT3-209ENST00000617930 ZMYND12Q9H0C1 365 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 MYOZ2Q9NPC6 264 aa19.95■□□□□ 0.78
CNOT3-209ENST00000617930 PGAP2Q9UHJ9 254 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms