RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PSMD14O00487 310 aa19.79■□□□□ 0.76
PCDHGC3-205ENST00000617641 ZNF75DP51815 510 aa19.79■□□□□ 0.76
PCDHGC3-205ENST00000617641 RSBN1LQ6PCB5 846 aaPredicted RBP19.79■□□□□ 0.76
PCDHGC3-205ENST00000617641 SYMPKQ92797 1274 aaKnown RBP19.79■□□□□ 0.76
PCDHGC3-205ENST00000617641 ZMYND12Q9H0C1 365 aa19.79■□□□□ 0.76
PCDHGC3-205ENST00000617641 KIF13BQ9NQT8 1826 aa19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 ACTN4O43707 911 aaKnown RBP19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 ZNF543Q08ER8 600 aa19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 CERKLQ49MI3 558 aaPredicted RBP19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 PLA2G4DQ86XP0 818 aa19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 ZNF830Q96NB3 372 aaPredicted RBP19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 PCDHA5Q9Y5H7 936 aa19.78■□□□□ 0.76
PCDHGC3-205ENST00000617641 PRR29P0C7W0 189 aa19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 GRAMD1CQ8IYS0 662 aa19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 CCDC12Q8WUD4 166 aaPredicted RBP19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 SMCO2A6NFE2 343 aa19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 POSTNQ15063 836 aa19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 IL17AQ16552 155 aa19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 INF2Q27J81 1249 aa19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 ELOA2Q8IYF1 753 aaPredicted RBP19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 FAM177A1Q8N128 213 aaPredicted RBP19.77■□□□□ 0.76
PCDHGC3-205ENST00000617641 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 TTBK2Q6IQ55 1244 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 C4orf32Q8N8J7 132 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 DHX58Q96C10 678 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 BPIFA3Q9BQP9 254 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 HOOK1Q9UJC3 728 aaKnown RBP19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 ZBTB12Q9Y330 459 aaPredicted RBP19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 ENTPD3O75355 529 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 CCDC96Q2M329 555 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 SOGA3Q5TF21 947 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 SARM1Q6SZW1 724 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 GMLQ99445 158 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 C6orf50Q9HD87 102 aa19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 ATF5Q9Y2D1 282 aaPredicted RBP19.76■□□□□ 0.75
PCDHGC3-205ENST00000617641 TATDN1Q6P1N9 297 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 TTC12Q9H892 705 aaPredicted RBP19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 GDF11O95390 407 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 EEF2P13639 858 aaKnown RBP19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 KCTD1Q719H9 257 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 COA7Q96BR5 231 aa19.75■□□□□ 0.75
PCDHGC3-205ENST00000617641 TCP10L2B9ZVM9 353 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 GNA11P29992 359 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 SLC16A2P36021 539 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 SEPT2Q15019 361 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 ADGRF4Q8IZF3 695 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 JMJD4Q9H9V9 463 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 RAD21O60216 631 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 PPP4R3BQ5MIZ7 849 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 KANSL2Q9H9L4 492 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 PIM2Q9P1W9 311 aa19.74■□□□□ 0.75
PCDHGC3-205ENST00000617641 GPATCH4Q5T3I0 446 aaKnown RBP19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 ARL6IP4Q66PJ3 421 aaKnown RBP19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 KANK3Q6NY19 840 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 KRT25Q7Z3Z0 450 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 DRC7Q8IY82 874 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 CSRNP1Q96S65 589 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 TMEM60Q9H2L4 133 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 NYAP2Q9P242 653 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 MAN1B1Q9UKM7 699 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 BMP6P22004 513 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 DLGAP5Q15398 846 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 SIAH1Q8IUQ4 282 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 NIM1KQ8IY84 436 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 TMOD2Q9NZR1 351 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 BIN2Q9UBW5 565 aaPredicted RBP19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 HDAC9Q9UKV0 1011 aa19.73■□□□□ 0.75
PCDHGC3-205ENST00000617641 ESYT2A0FGR8 921 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 GOLGA6L6A8MZA4 724 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 hCG_1984214I3L0E3 225 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 SLFN14P0C7P3 912 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 TGFB2P61812 414 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 JAG1P78504 1218 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 NCAPHQ15003 741 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 NONOQ15233 471 aaKnown RBP eCLIP19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 ABCB5Q2M3G0 1257 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 TMEM179Q6ZVK1 233 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 ZNF713Q8N859 430 aaPredicted RBP19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 SMARCE1Q969G3 411 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 ZNRF3Q9ULT6 936 aa19.72■□□□□ 0.75
PCDHGC3-205ENST00000617641 COL2A1P02458 1487 aaPredicted RBP19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 PPP1R11O60927 126 aaPredicted RBP19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 AFMP43652 599 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 SARSP49591 514 aaKnown RBP19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 ICA1Q05084 483 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 NT5DC1Q5TFE4 455 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 JAKMIP3Q5VZ66 844 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 OGFOD1Q8N543 542 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 MKL1Q969V6 931 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 TMEM260Q9NX78 707 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 ZNF70Q9UC06 446 aaPredicted RBP19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 PNMA6FA0A0J9YX94 578 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 USP17L10C9JJH3 530 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 ZNF500O60304 480 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms