RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 RANBP17Q9H2T7 1088 aaKnown RBP13.53□□□□□ -0.24
PDPN-211ENST00000617617 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
PDPN-211ENST00000617617 STAT2P52630 851 aa13.53□□□□□ -0.24
PDPN-211ENST00000617617 VGLL4Q14135 290 aa13.53□□□□□ -0.24
PDPN-211ENST00000617617 CCDC96Q2M329 555 aa13.53□□□□□ -0.24
PDPN-211ENST00000617617 PRAMEF18Q5VWM3 479 aa13.53□□□□□ -0.24
PDPN-211ENST00000617617 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
PDPN-211ENST00000617617 ZKSCAN4Q969J2 545 aaPredicted RBP13.53□□□□□ -0.24
PDPN-211ENST00000617617 MYPNQ86TC9 1320 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 SPDYE5A6NIY4 337 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 EAPPQ56P03 285 aaPredicted RBP13.52□□□□□ -0.24
PDPN-211ENST00000617617 TTBK2Q6IQ55 1244 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.24
PDPN-211ENST00000617617 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.24
PDPN-211ENST00000617617 KRT2P35908 639 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 KCTD1Q719H9 257 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 ZNF396Q96N95 335 aaPredicted RBP13.52□□□□□ -0.25
PDPN-211ENST00000617617 PIGSQ96S52 555 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 CSADQ9Y600 493 aa13.52□□□□□ -0.25
PDPN-211ENST00000617617 MYH7BA7E2Y1 1941 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 CXCL11O14625 94 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 PPIL2Q13356 520 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 ERO1BQ86YB8 467 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 CCDC82Q8N4S0 544 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 ADAMTS5Q9UNA0 930 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 DTNBO60941 627 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 KRT85P78386 507 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
PDPN-211ENST00000617617 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 SCAND2PQ9GZW5 306 aaPredicted RBP13.51□□□□□ -0.25
PDPN-211ENST00000617617 UBA5Q9GZZ9 404 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 POLR3EQ9NVU0 708 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 VPS54Q9P1Q0 977 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 PRR12Q9ULL5 1215 aa13.51□□□□□ -0.25
PDPN-211ENST00000617617 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 NASPP49321 788 aaPredicted RBP13.5□□□□□ -0.25
PDPN-211ENST00000617617 GHRHRQ02643 423 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
PDPN-211ENST00000617617 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
PDPN-211ENST00000617617 GNA11P29992 359 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
PDPN-211ENST00000617617 FEZ1Q99689 392 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 SMCHD1A6NHR9 2005 aa13.5□□□□□ -0.25
PDPN-211ENST00000617617 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 VCAM1P19320 739 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 MTMR2Q13614 643 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 PRRT2Q7Z6L0 340 aaPredicted RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 ZHX2Q9Y6X8 837 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 YEATS4O95619 227 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 OAZ1P54368 228 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 SPP2Q13103 211 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 PRPF38AQ8NAV1 312 aaKnown RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 C6orf50Q9HD87 102 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 KCNJ14Q9UNX9 436 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 DNM1Q05193 864 aaKnown RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 NUP88Q99567 741 aaPredicted RBP13.49□□□□□ -0.25
PDPN-211ENST00000617617 SLF1Q9BQI6 1058 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 AMNQ9BXJ7 453 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 LMBRD1Q9NUN5 540 aa13.49□□□□□ -0.25
PDPN-211ENST00000617617 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
PDPN-211ENST00000617617 NLRP5P59047 1200 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 BTBD18B2RXH4 712 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 ATP2A1O14983 1001 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 SLC16A2P36021 539 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms