RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 ZNF157P51786 506 aaPredicted RBP23.63■■□□□ 1.37
SDHA-220ENST00000617470 PPATQ06203 517 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 MKRN3Q13064 507 aaKnown RBP23.63■■□□□ 1.37
SDHA-220ENST00000617470 MTMR2Q13614 643 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 RBSNQ9H1K0 784 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 USP17L10C9JJH3 530 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 APLP1P51693 650 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 BRAPQ7Z569 592 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 MKL1Q969V6 931 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 WDR18Q9BV38 432 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 AFG3L2Q9Y4W6 797 aa23.63■■□□□ 1.37
SDHA-220ENST00000617470 DDAH1O94760 285 aa23.62■■□□□ 1.37
SDHA-220ENST00000617470 MYSM1Q5VVJ2 828 aa23.62■■□□□ 1.37
SDHA-220ENST00000617470 PAXIP1Q6ZW49 1069 aaPredicted RBP23.62■■□□□ 1.37
SDHA-220ENST00000617470 RTEL1Q9NZ71 1219 aa23.62■■□□□ 1.37
SDHA-220ENST00000617470 TMX2Q9Y320 296 aa23.62■■□□□ 1.37
SDHA-220ENST00000617470 IRF6O14896 467 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 PLEKHA8P1O95397 391 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 TRIM22Q8IYM9 498 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 GOPCQ9HD26 462 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 MYH4Q9Y623 1939 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 CALM1P0DP23 149 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 CALM2P0DP24 149 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 CALM3P0DP25 149 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 PPIL2Q13356 520 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 RGMBQ6NW40 437 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 SPICE1Q8N0Z3 855 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 MYH6P13533 1939 aa23.61■■□□□ 1.37
SDHA-220ENST00000617470 DEXIO95424 95 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 BACE1P56817 501 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 DGKZQ13574 1117 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 WASF1Q92558 559 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 SHISA4Q96DD7 197 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 WNK4Q96J92 1243 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 CLIC4Q9Y696 253 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 F5H6K3 240 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 U2AF2P26368 475 aaKnown RBP eCLIP23.6■■□□□ 1.37
SDHA-220ENST00000617470 GJA5P36382 358 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 HMGCS2P54868 508 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 KLRC3Q07444 240 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 GRM1Q13255 1194 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 PKN1Q16512 942 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 RNF26Q9BY78 433 aaPredicted RBP23.6■■□□□ 1.37
SDHA-220ENST00000617470 KIAA1683Q9H0B3 1180 aa23.6■■□□□ 1.37
SDHA-220ENST00000617470 RBM28Q9NW13 759 aaKnown RBP23.6■■□□□ 1.37
SDHA-220ENST00000617470 USP14P54578 494 aa23.59■■□□□ 1.37
SDHA-220ENST00000617470 SLFN13Q68D06 897 aa23.59■■□□□ 1.37
SDHA-220ENST00000617470 TMTC3Q6ZXV5 915 aa23.59■■□□□ 1.37
SDHA-220ENST00000617470 RASGRP2Q7LDG7 609 aa23.59■■□□□ 1.37
SDHA-220ENST00000617470 VCPKMTQ9H867 229 aa23.59■■□□□ 1.37
SDHA-220ENST00000617470 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
SDHA-220ENST00000617470 GOLGA6L4A6NEF3 574 aa23.58■■□□□ 1.37
SDHA-220ENST00000617470 LINC00301Q8NCQ3 95 aa23.58■■□□□ 1.37
SDHA-220ENST00000617470 POLR3EQ9NVU0 708 aa23.58■■□□□ 1.37
SDHA-220ENST00000617470 PHIPQ8WWQ0 1821 aa23.58■■□□□ 1.37
SDHA-220ENST00000617470 NDUFB10O96000 172 aa23.58■■□□□ 1.36
SDHA-220ENST00000617470 NASPP49321 788 aaPredicted RBP23.58■■□□□ 1.36
SDHA-220ENST00000617470 TRIM29Q14134 588 aa23.58■■□□□ 1.36
SDHA-220ENST00000617470 SRBD1Q8N5C6 995 aaKnown RBP23.58■■□□□ 1.36
SDHA-220ENST00000617470 GMCL1P1Q8NEA9 526 aa23.58■■□□□ 1.36
SDHA-220ENST00000617470 TMOD4Q9NZQ9 345 aa23.58■■□□□ 1.36
SDHA-220ENST00000617470 KCNJ14Q9UNX9 436 aa23.58■■□□□ 1.36
SDHA-220ENST00000617470 C19orf81C9J6K1 198 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 PRPF3O43395 683 aaKnown RBP23.57■■□□□ 1.36
SDHA-220ENST00000617470 MMP1P03956 469 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 CCDC96Q2M329 555 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 KIAA1755Q5JYT7 1200 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 SPRYD7Q5W111 196 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 USP17L2Q6R6M4 530 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 RASAL3Q86YV0 1011 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
SDHA-220ENST00000617470 DACT1Q9NYF0 836 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 SYNPO2Q9UMS6 1093 aa23.57■■□□□ 1.36
SDHA-220ENST00000617470 CXCL11O14625 94 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 LETM1O95202 739 aaPredicted RBP23.56■■□□□ 1.36
SDHA-220ENST00000617470 SLC1A4P43007 532 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 GADL1Q6ZQY3 521 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 EMILIN3Q9NT22 766 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 CNTNAP5Q8WYK1 1306 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 NR1I2O75469 434 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 PDHBP11177 359 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 SNAPC2Q13487 334 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 CTCFLQ8NI51 663 aaPredicted RBP23.56■■□□□ 1.36
SDHA-220ENST00000617470 FUCA2Q9BTY2 467 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 TSPY26PQ9H489 355 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 KCNH4Q9UQ05 1017 aa23.56■■□□□ 1.36
SDHA-220ENST00000617470 FRMPD2Q68DX3 1309 aaPredicted RBP23.56■■□□□ 1.36
SDHA-220ENST00000617470 hCG_1642624A0A1W2PR95 340 aa23.55■■□□□ 1.36
SDHA-220ENST00000617470 YEATS4O95619 227 aa23.55■■□□□ 1.36
SDHA-220ENST00000617470 GOLGA8HP0CJ92 632 aa23.55■■□□□ 1.36
SDHA-220ENST00000617470 ZBTB48P10074 688 aaPredicted RBP23.55■■□□□ 1.36
SDHA-220ENST00000617470 KCTD1Q719H9 257 aa23.55■■□□□ 1.36
SDHA-220ENST00000617470 BICD2Q8TD16 824 aa23.55■■□□□ 1.36
SDHA-220ENST00000617470 V9GY48 417 aaPredicted RBP23.55■■□□□ 1.36
SDHA-220ENST00000617470 BTBD18B2RXH4 712 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 PARP1P09874 1014 aaKnown RBP23.54■■□□□ 1.36
SDHA-220ENST00000617470 ANO1Q5XXA6 986 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 GOLPH3LQ9H4A5 285 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 GPCPD1Q9NPB8 672 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 PCDHA7Q9UN72 937 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms