RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ZNF174Q15697 407 aa13.83□□□□□ -0.2
TCF4-248ENST00000616053 DCAF4L1Q3SXM0 396 aa13.83□□□□□ -0.2
TCF4-248ENST00000616053 TAGAPQ8N103 731 aa13.83□□□□□ -0.2
TCF4-248ENST00000616053 NEUROD4Q9HD90 331 aa13.83□□□□□ -0.2
TCF4-248ENST00000616053 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.2
TCF4-248ENST00000616053 POLR3CQ9BUI4 534 aaPredicted RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 H0YCG3 227 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 DMP1Q13316 513 aaPredicted RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 DDX53Q86TM3 631 aaKnown RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 PBXIP1Q96AQ6 731 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 DNAI1Q9UI46 699 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 PHF21AQ96BD5 680 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 OSBPL10Q9BXB5 764 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 CPSF2Q9P2I0 782 aaKnown RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 ERBINQ96RT1 1412 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 H3BRJ5 948 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 SLC39A6Q13433 755 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 MXD4Q14582 209 aaPredicted RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 PHKG1Q16816 387 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 NT5DC4Q86YG4 428 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 TRIM59Q8IWR1 403 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 IL16Q14005 1332 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 URGCPQ8TCY9 931 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 PAG1Q9NWQ8 432 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 FAM170AA1A519 330 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 TTC19Q6DKK2 380 aaPredicted RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 PDCD6IPQ8WUM4 868 aaKnown RBP13.82□□□□□ -0.2
TCF4-248ENST00000616053 OTULINQ96BN8 352 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 CCNYQ8ND76 341 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
TCF4-248ENST00000616053 LRRC4Q9HBW1 653 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 SERTAD1Q9UHV2 236 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 ZMAT2Q96NC0 199 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 RPRD1BQ9NQG5 326 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 GEMIN8Q9NWZ8 242 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 FIS1Q9Y3D6 152 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 H7C0C1 242 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 TROVE2P10155 538 aaKnown RBP eCLIP13.81□□□□□ -0.2
TCF4-248ENST00000616053 ATP5OP48047 213 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 NBPF20Q3BBV1 942 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 THEMIS2Q5TEJ8 643 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 IREB2P48200 963 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 KRT27Q7Z3Y8 459 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 PAWRQ96IZ0 340 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 DENND3A2RUS2 1198 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 YWHAHQ04917 246 aaPredicted RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 ARMC6Q6NXE6 501 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 DNAAF3Q8N9W5 541 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 SCG3Q8WXD2 468 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 ANKRD36BP1Q96IX9 119 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
TCF4-248ENST00000616053 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.2
TCF4-248ENST00000616053 ANXA1P04083 346 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.81□□□□□ -0.24e-7■■■■■ 58.1
TCF4-248ENST00000616053 MRPS27Q92552 414 aaKnown RBP13.81□□□□□ -0.2
TCF4-248ENST00000616053 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
TCF4-248ENST00000616053 CAPRIN1Q14444 709 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 NME9Q86XW9 330 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 ZMYND10O75800 440 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 PIK3CAP42336 1068 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 CALCRLQ16602 461 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
TCF4-248ENST00000616053 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 ADCY1Q08828 1119 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 Q6ZUG5 572 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 PPWD1Q96BP3 646 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 CENPKQ9BS16 269 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 AATFQ9NY61 560 aaKnown RBP eCLIP13.8□□□□□ -0.2
TCF4-248ENST00000616053 ADD3Q9UEY8 706 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 CAVIN2O95810 425 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 DLATP10515 647 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 SYT1P21579 422 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 PSMA3P25788 255 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 CUL1Q13616 776 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 TBC1D19Q8N5T2 526 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 Q9H521 79 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 CACNA2D2Q9NY47 1150 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 RHOXF2BP0C7M4 288 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 RXRBP28702 533 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 RHOXF2Q9BQY4 288 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms