RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 TRIM11Q96F44 468 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 IMPACTQ9P2X3 320 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 SYCE1LA8MT33 242 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 MCM7P33993 719 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 TRIM14Q14142 442 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 JADE1Q6IE81 842 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 CARD10Q9BWT7 1032 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 FAM204AQ9H8W3 233 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 LRRC59Q96AG4 307 aaKnown RBP10.16□□□□□ -0.78
COL12A1-211ENST00000615798 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
COL12A1-211ENST00000615798 ZSCAN32Q9NX65 697 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 ELP1O95163 1332 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 EFCAB14O75071 495 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 TOM1L2Q6ZVM7 507 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 TEX11Q8IYF3 940 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 MEIS3Q99687 375 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 CHMLP26374 656 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 GRIN1Q05586 938 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 NBPF14Q5TI25 921 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 HS2ST1Q7LGA3 356 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 TCP11Q8WWU5 503 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 RAB17Q9H0T7 212 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 IDEP14735 1019 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 ASZ1Q8WWH4 475 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 APBA1Q02410 837 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 CAVIN4Q5BKX8 364 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 ABCF2Q9UG63 623 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 IARSP41252 1262 aaKnown RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 DEFA1P59665 94 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 DEFA3P59666 94 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 TYRO3Q06418 890 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 SNX1Q13596 522 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 DENND6AQ8IWF6 608 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 PPWD1Q96BP3 646 aaKnown RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 CAPN11Q9UMQ6 739 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 KIF23Q02241 960 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 SSRP1Q08945 709 aaKnown RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 BRD8Q9H0E9 1235 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 NDUFA5Q16718 116 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 TTF2Q9UNY4 1162 aaKnown RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 CPSF1Q10570 1443 aaKnown RBP10.15□□□□□ -0.78
COL12A1-211ENST00000615798 RAD51AP2Q09MP3 1159 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 NDEL1Q9GZM8 345 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 HYOU1Q9Y4L1 999 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 PI4KAP2A4QPH2 592 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 CALM1P0DP23 149 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 CALM2P0DP24 149 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 CALM3P0DP25 149 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 TMTC3Q6ZXV5 915 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 PI4KAP1Q8N8J0 262 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 TCP11L1Q9NUJ3 509 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 PLA2R1Q13018 1463 aa10.15□□□□□ -0.78
COL12A1-211ENST00000615798 AKR1B15C9JRZ8 316 aaPredicted RBP10.15□□□□□ -0.79
COL12A1-211ENST00000615798 PYGMP11217 842 aa10.15□□□□□ -0.79
COL12A1-211ENST00000615798 SLC9A5Q14940 896 aa10.15□□□□□ -0.79
COL12A1-211ENST00000615798 ENOX1Q8TC92 643 aaKnown RBP10.15□□□□□ -0.79
COL12A1-211ENST00000615798 CYLC2Q14093 348 aaPredicted RBP10.15□□□□□ -0.79
COL12A1-211ENST00000615798 BCAS4Q8TDM0 211 aa10.15□□□□□ -0.79
COL12A1-211ENST00000615798 PPP2R5EQ16537 467 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 MAP3K2Q9Y2U5 619 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 ZNF354CQ86Y25 554 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 STAMBPL1Q96FJ0 436 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 METTL24Q5JXM2 366 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 SIKE1Q9BRV8 207 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 PODNQ7Z5L7 613 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 OSBPL3Q9H4L5 887 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 NUMA1Q14980 2115 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 ZNF500O60304 480 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-211ENST00000615798 MMEP08473 750 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 MYL6BP14649 208 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 HLA-DPA1P20036 260 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 TADA2BQ86TJ2 420 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 KIFAP3Q92845 792 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 MADDQ8WXG6 1647 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 CATIPQ7Z7H3 387 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 USP48Q86UV5 1035 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 NCAPG2Q86XI2 1143 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 OR9Q1Q8NGQ5 310 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 TRIM39Q9HCM9 518 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 SPAG7O75391 227 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 IL13P35225 146 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 RNF207Q6ZRF8 634 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 KLHL29Q96CT2 875 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 DACH2Q96NX9 599 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 STRIP2Q9ULQ0 834 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 NOX5Q96PH1 765 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 LZTS1Q9Y250 596 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 RGS12O14924 1447 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 KRT15P19012 456 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 WASHC5Q12768 1159 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms