RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 CUL4AQ13619 759 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 GRB14Q14449 540 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 IVNS1ABPQ9Y6Y0 642 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 VCANP13611 3396 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 A0A0G2JMZ2 1700 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 AKR1B1P15121 316 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 ICA1Q05084 483 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 TRPV1Q8NER1 839 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
COL4A1-205ENST00000615732 GUCD1Q96NT3 240 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 NEK1Q96PY6 1258 aa12.6□□□□□ -0.39
COL4A1-205ENST00000615732 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
COL4A1-205ENST00000615732 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
COL4A1-205ENST00000615732 SH2B1Q9NRF2 756 aaPredicted RBP12.6□□□□□ -0.39
COL4A1-205ENST00000615732 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
COL4A1-205ENST00000615732 CDH23Q9H251 3354 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 CYP21A2P08686 494 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 ADORA2AP29274 412 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 ATP2B2Q01814 1243 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 PLS1Q14651 629 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 ANO1Q5XXA6 986 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 ATG4CQ96DT6 458 aa12.59□□□□□ -0.39
COL4A1-205ENST00000615732 PUS7LQ9H0K6 701 aaKnown RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
COL4A1-205ENST00000615732 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 IGHA2P01877 340 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 HOXC6P09630 235 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 FGD1P98174 961 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 LPAR1Q92633 364 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 RLFQ13129 1914 aa12.58□□□□□ -0.4
COL4A1-205ENST00000615732 DNM1LO00429 736 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 RAD21O60216 631 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 MSCO60682 206 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 FLOT1O75955 427 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
COL4A1-205ENST00000615732 APPP05067 770 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 CYBAP13498 195 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 ERCC3P19447 782 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 COG2Q14746 738 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 DPP9Q86TI2 863 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 NCAPG2Q86XI2 1143 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
COL4A1-205ENST00000615732 FAM161BQ96MY7 647 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
COL4A1-205ENST00000615732 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
COL4A1-205ENST00000615732 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 TAF6LQ9Y6J9 622 aa12.57□□□□□ -0.4
COL4A1-205ENST00000615732 GOLGA6L22H0YM25 854 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 COBLO75128 1261 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 GNAT2P19087 354 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 PTMSP20962 102 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 MCM4P33991 863 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 RTP1P59025 263 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 GJC2Q5T442 439 aaPredicted RBP12.56□□□□□ -0.4
COL4A1-205ENST00000615732 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
COL4A1-205ENST00000615732 SIAH1Q8IUQ4 282 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL4A1-205ENST00000615732 STK11IPQ8N1F8 1099 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 LBHD1Q9BQE6 289 aaPredicted RBP12.56□□□□□ -0.4
COL4A1-205ENST00000615732 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
COL4A1-205ENST00000615732 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
COL4A1-205ENST00000615732 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 USP17L21D6R901 530 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 E7EWF7 191 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 ZNF213O14771 459 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 DSG3P32926 999 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 CDK8P49336 464 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 HAND2P61296 217 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 PRAMEF19Q5SWL8 479 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 C16orf86Q6ZW13 317 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
COL4A1-205ENST00000615732 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
COL4A1-205ENST00000615732 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 ATP11BQ9Y2G3 1177 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 SLC4A4Q9Y6R1 1079 aa12.55□□□□□ -0.4
COL4A1-205ENST00000615732 PRUNE2Q8WUY3 3088 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms