RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 EMBQ6PCB8 327 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 YTHDF3Q7Z739 585 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 FAM167BQ9BTA0 163 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 EHD2Q9NZN4 543 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 L3MBTL1Q9Y468 752 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 TRIM21P19474 475 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 IFFO1Q0D2I5 559 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 PTPAQ15257 358 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 C11orf91Q3C1V1 193 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 KSR2Q6VAB6 950 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 ARFGAP2Q8N6H7 521 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 SMCR8Q8TEV9 937 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 MYL10Q9BUA6 226 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 NOD2Q9HC29 1040 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 STIM2Q9P246 746 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 SNUPNO95149 360 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 TTF1Q15361 905 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 CCDC26Q8TAB7 109 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 PAG1Q9NWQ8 432 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 BTBD18B2RXH4 712 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 DNM1LO00429 736 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 RTN2O75298 545 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 TACC1O75410 805 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 COPB1P53618 953 aaKnown RBP11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 GUCY2DQ02846 1103 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 HVCN1Q96D96 273 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 EPB41L5Q9HCM4 733 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 MST1RQ04912 1400 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 GRIK3Q13003 919 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 FAM228AQ86W67 206 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 NCOA7Q8NI08 942 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 DSCC1Q9BVC3 393 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 LACRTQ9GZZ8 138 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 GMNCA6NCL1 334 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 TMOD1P28289 359 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 SCTRP47872 440 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 KDM7AQ6ZMT4 941 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 IFT20Q8IY31 132 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 BLZF1Q9H2G9 400 aa11.53□□□□□ -0.56
TNFAIP3-208ENST00000615468 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 SLC8A3P57103 927 aa11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 DRP2Q13474 957 aa11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 GKAP1Q5VSY0 366 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 PAPD7Q5XG87 772 aaKnown RBP11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 LINS1Q8NG48 757 aa11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.56
TNFAIP3-208ENST00000615468 FMN2Q9NZ56 1722 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 A0A087WZG4 1122 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 IL2RBP14784 551 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 CCDC63Q8NA47 563 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 HOOK2Q96ED9 719 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 REXO2Q9Y3B8 237 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 TOPAZ1Q8N9V7 1692 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 ATXN2Q99700 1313 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 KCNJ18B7U540 433 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 ZNF213O14771 459 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 DIAPH2O60879 1101 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 ANP32DO95626 131 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 RBM5P52756 815 aaKnown RBP eCLIP11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 TIMM10P62072 90 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 KCNJ12Q14500 433 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 CUL5Q93034 780 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 OSBPL7Q9BZF2 842 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 BATF3Q9NR55 127 aa11.52□□□□□ -0.57
TNFAIP3-208ENST00000615468 GCOM1H8Y6P7 765 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 UPP2O95045 317 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 MYZAPP0CAP1 466 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 CARSP49589 748 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 TRIM14Q14142 442 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 ANKRD20A8PQ5CZ79 823 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 TRIM68Q6AZZ1 485 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 NFRKBQ6P4R8 1299 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 CCDC47Q96A33 483 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 ATP6V1G3Q96LB4 118 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 CCDC42Q96M95 316 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 DDX21Q9NR30 783 aaKnown RBP eCLIP11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 GOLGA8AA7E2F4 631 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 SPAG1Q07617 926 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 PAK2Q13177 524 aa11.51□□□□□ -0.57
TNFAIP3-208ENST00000615468 SPRED3Q2MJR0 410 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms