RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 STAT3P40763 770 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 TRIM32Q13049 653 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 COL9A3Q14050 684 aaPredicted RBP19.67■□□□□ 0.74
CBWD3-211ENST00000615061 CCL14Q16627 93 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 TTBK2Q6IQ55 1244 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 DGKHQ86XP1 1220 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 CPXCR1Q8N123 301 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 TRIB2Q92519 343 aa19.67■□□□□ 0.74
CBWD3-211ENST00000615061 RBBP6Q7Z6E9 1792 aaKnown RBP19.66■□□□□ 0.74
CBWD3-211ENST00000615061 PDHBP11177 359 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 SLC16A2P36021 539 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 SLC4A3P48751 1232 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 SNAP25P60880 206 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 TRDNQ13061 729 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 GRB14Q14449 540 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 CHST3Q7LGC8 479 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 SHCBP1Q8NEM2 672 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 DCAF4Q8WV16 495 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 SLC38A10Q9HBR0 1119 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 RAVER2Q9HCJ3 691 aaKnown RBP19.66■□□□□ 0.74
CBWD3-211ENST00000615061 RIPK3Q9Y572 518 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 IVNS1ABPQ9Y6Y0 642 aa19.66■□□□□ 0.74
CBWD3-211ENST00000615061 NT5C2P49902 561 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 SNRNP48Q6IEG0 339 aaKnown RBP19.65■□□□□ 0.74
CBWD3-211ENST00000615061 CASC1Q6TDU7 716 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 RIOX2Q8IUF8 465 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 GPCPD1Q9NPB8 672 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 SLC15A5A6NIM6 579 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 SLC27A2O14975 620 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 ZBED4O75132 1171 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 ADORA2AP29274 412 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 RGS2P41220 211 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 MAP2K5Q13163 448 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 NECTIN1Q15223 517 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 PNMA1Q8ND90 353 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 CHURC1Q8WUH1 139 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 ANKS1AQ92625 1134 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 TEX13BQ9BXU2 312 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 MROH8Q9H579 483 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 PRR12Q9ULL5 1215 aa19.65■□□□□ 0.74
CBWD3-211ENST00000615061 SNHG28P0DPA3 235 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 CCL5P13501 91 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 SEC23AQ15436 765 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 CREB3L3Q68CJ9 461 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 RALYLQ86SE5 291 aaKnown RBP19.64■□□□□ 0.73
CBWD3-211ENST00000615061 FAM160B2Q86V87 743 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 NCOA7Q8NI08 942 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 UNC93B1Q9H1C4 597 aa19.64■□□□□ 0.73
CBWD3-211ENST00000615061 ZNF236Q9UL36 1845 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 SLC25A27O95847 323 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 HMGCRP04035 888 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 GOLGA8HP0CJ92 632 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 XRCC5P13010 732 aaKnown RBP19.63■□□□□ 0.73
CBWD3-211ENST00000615061 UBXN2AP68543 259 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 CCDC178Q5BJE1 867 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 APBA2Q99767 749 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 TMEM106CQ9BVX2 250 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 KAT14Q9H8E8 782 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 SENP2Q9HC62 589 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 FLRT1Q9NZU1 646 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 CTDP1Q9Y5B0 961 aaPredicted RBP19.63■□□□□ 0.73
CBWD3-211ENST00000615061 BAZ2BQ9UIF8 2168 aaKnown RBP19.63■□□□□ 0.73
CBWD3-211ENST00000615061 PLXNA1Q9UIW2 1896 aa19.63■□□□□ 0.73
CBWD3-211ENST00000615061 PLA2G6O60733 806 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 COBLO75128 1261 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 TAL1P17542 331 aaPredicted RBP19.62■□□□□ 0.73
CBWD3-211ENST00000615061 EN2P19622 333 aaPredicted RBP19.62■□□□□ 0.73
CBWD3-211ENST00000615061 ANTXR2P58335 489 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 MB21D2Q8IYB1 491 aaPredicted RBP19.62■□□□□ 0.73
CBWD3-211ENST00000615061 RNF208Q9H0X6 261 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 ZNF536O15090 1300 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 ATP2A1O14983 1001 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 STRNO43815 780 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 RGS19P49795 217 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
CBWD3-211ENST00000615061 CCDC174Q6PII3 467 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 AGBL1Q96MI9 1066 aa19.62■□□□□ 0.73
CBWD3-211ENST00000615061 ZKSCAN1P17029 563 aaPredicted RBP19.61■□□□□ 0.73
CBWD3-211ENST00000615061 BTNL9Q6UXG8 535 aa19.61■□□□□ 0.73
CBWD3-211ENST00000615061 DPP9Q86TI2 863 aa19.61■□□□□ 0.73
CBWD3-211ENST00000615061 HOMER2Q9NSB8 354 aa19.61■□□□□ 0.73
CBWD3-211ENST00000615061 IFIT3O14879 490 aaKnown RBP19.6■□□□□ 0.73
CBWD3-211ENST00000615061 PGK2P07205 417 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 HOXC6P09630 235 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 FCER1AP12319 257 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 SYDE2Q5VT97 1194 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 MMP19Q99542 508 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 GPHNQ9NQX3 736 aaPredicted RBP19.6■□□□□ 0.73
CBWD3-211ENST00000615061 RASEFQ8IZ41 740 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 UBA5Q9GZZ9 404 aa19.6■□□□□ 0.73
CBWD3-211ENST00000615061 PRKAR2AP13861 404 aaKnown RBP19.59■□□□□ 0.73
CBWD3-211ENST00000615061 OAZ1P54368 228 aa19.59■□□□□ 0.73
CBWD3-211ENST00000615061 ABRAQ8N0Z2 381 aa19.59■□□□□ 0.73
CBWD3-211ENST00000615061 RANBP17Q9H2T7 1088 aaKnown RBP19.59■□□□□ 0.73
CBWD3-211ENST00000615061 MYH6P13533 1939 aa19.59■□□□□ 0.73
CBWD3-211ENST00000615061 CEP290O15078 2479 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms