RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PALM3A6NDB9 673 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 NDUFB10O96000 172 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 GNRH1P01148 92 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 GOLGA8HP0CJ92 632 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 SNHG28P0DPA3 235 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 PDHBP11177 359 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 FDPSP14324 419 aaKnown RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 KIF22Q14807 665 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 TMTC3Q6ZXV5 915 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 SRBD1Q8N5C6 995 aaKnown RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 FANCBQ8NB91 859 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 ARMC5Q96C12 935 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 INTS4Q96HW7 963 aaKnown RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 PARK7Q99497 189 aaKnown RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 NUP88Q99567 741 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 CPA4Q9UI42 421 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 TMX2Q9Y320 296 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 A0A0G2JMZ2 1700 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 TRIM75PA6NK02 468 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 CYTH3O43739 400 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 CALM1P0DP23 149 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 CALM2P0DP24 149 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 CALM3P0DP25 149 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 CYP2C8P10632 490 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 BCRP11274 1271 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 IFNAR1P17181 557 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 GJB2P29033 226 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 CTGFP29279 349 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 PRMT2P55345 433 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 ZNF543Q08ER8 600 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 SPP2Q13103 211 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 SYNE3Q6ZMZ3 975 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 GADL1Q6ZQY3 521 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 ZNF280CQ8ND82 737 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 PHKBQ93100 1093 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 SHISA4Q96DD7 197 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 DDX11Q96FC9 970 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 AIFM3Q96NN9 605 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 WDR18Q9BV38 432 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 AGTPBP1Q9UPW5 1226 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
PCDH9-205ENST00000614931 RBBP6Q7Z6E9 1792 aaKnown RBP9.35□□□□□ -0.91
PCDH9-205ENST00000614931 hCG_1642624A0A1W2PR95 340 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 F5H6K3 240 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 PSMC4P43686 418 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 FOSBP53539 338 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 KLRC3Q07444 240 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 MTMR2Q13614 643 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 PKP1Q13835 747 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 CCDC96Q2M329 555 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 SH3D19Q5HYK7 790 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 KCTD1Q719H9 257 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 SPICE1Q8N0Z3 855 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-205ENST00000614931 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-205ENST00000614931 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 LLPHQ9BRT6 129 aaKnown RBP9.34□□□□□ -0.91
PCDH9-205ENST00000614931 SLC26A6Q9BXS9 759 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 VCPKMTQ9H867 229 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 AS3MTQ9HBK9 375 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 RBM28Q9NW13 759 aaKnown RBP9.34□□□□□ -0.91
PCDH9-205ENST00000614931 SMC3Q9UQE7 1217 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 HTTP42858 3142 aa9.34□□□□□ -0.91
PCDH9-205ENST00000614931 STK36Q9NRP7 1315 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 KLRF2D3W0D1 207 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 CPLX1O14810 134 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 RAD21O60216 631 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 PARP1P09874 1014 aaKnown RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 SLC16A2P36021 539 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 PKN1Q16512 942 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 ASPRV1Q53RT3 343 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 FAM83BQ5T0W9 1011 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 TREML2Q5T2D2 321 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 DCAF4Q8WV16 495 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 GMCL1Q96IK5 515 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 ZNF333Q96JL9 665 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 KIAA1683Q9H0B3 1180 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 GJB4Q9NTQ9 266 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 ORC3Q9UBD5 711 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 DAXXQ9UER7 740 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 SRRDQ9UH36 339 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 SYNPO2Q9UMS6 1093 aa9.33□□□□□ -0.92
PCDH9-205ENST00000614931 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 MGAMO43451 1857 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms