RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 USP17L13C9JLJ4 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L11C9JVI0 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L18D6R9N7 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L22D6RA61 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L17D6RBQ6 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L19D6RCP7 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L20D6RJB6 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 UBE2Q2LH0YL09 131 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 CYTH3O43739 400 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SLC10A3P09131 477 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 GJB2P29033 226 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 GJA5P36382 358 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 GTF2A2P52657 109 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 NUCB2P80303 420 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L24Q0WX57 530 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SPP2Q13103 211 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 STK3Q13188 491 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 PABPC4Q13310 644 aaKnown RBP eCLIP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SNAPC2Q13487 334 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 MTMR2Q13614 643 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SPRYD7Q5W111 196 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 DLK2Q6UY11 383 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 CATSPERGQ6ZRH7 1159 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 ANKRD23Q86SG2 305 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 REM2Q8IYK8 340 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 STAG2Q8N3U4 1231 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 OPTNQ96CV9 577 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SLC10A4Q96EP9 437 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 CLMNQ96JQ2 1002 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 GLT8D2Q9H1C3 349 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 ELP3Q9H9T3 547 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 TMOD4Q9NZQ9 345 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 ORC3Q9UBD5 711 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 AGTPBP1Q9UPW5 1226 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 ZNF236Q9UL36 1845 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 COL11A1P12107 1806 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 PNMA6FA0A0J9YX94 578 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 TMEM88BA6NKF7 163 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 JAK2O60674 1132 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 CETPP11597 493 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SCG2P13521 617 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 STAT2P52630 851 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 TTLL12Q14166 644 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 CCDC96Q2M329 555 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 NOL8Q76FK4 1167 aaKnown RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 SAPCD2Q86UD0 394 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 RASAL3Q86YV0 1011 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 RRP36Q96EU6 259 aaKnown RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 LARP6Q9BRS8 491 aaKnown RBP7.22□□□□□ -1.25
CBWD3-210ENST00000614398 JMJD4Q9H9V9 463 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 CHMP5Q9NZZ3 219 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 PPP1R9AQ9ULJ8 1098 aa7.22□□□□□ -1.25
CBWD3-210ENST00000614398 ZBTB5O15062 677 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 BRD1O95696 1058 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 CLCN1P35523 988 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 ATP2B2Q01814 1243 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 TKFCQ3LXA3 575 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 FAM83BQ5T0W9 1011 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 MCTP2Q6DN12 878 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 MOB2Q70IA6 237 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 MB21D1Q8N884 522 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 PRPF38AQ8NAV1 312 aaKnown RBP7.21□□□□□ -1.25
CBWD3-210ENST00000614398 REPS2Q8NFH8 660 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 CCDC12Q8WUD4 166 aaPredicted RBP7.21□□□□□ -1.25
CBWD3-210ENST00000614398 CCDC102AQ96A19 550 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 MS4A4AQ96JQ5 239 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 SLF1Q9BQI6 1058 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 CREBZFQ9NS37 354 aa7.21□□□□□ -1.25
CBWD3-210ENST00000614398 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.21□□□□□ -1.25
CBWD3-210ENST00000614398 MANSC4A6NHS7 340 aaPredicted RBP7.21□□□□□ -1.26
CBWD3-210ENST00000614398 RASSF10A6NK89 507 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 RXRAP19793 462 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 DSG3P32926 999 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 COPB2P35606 906 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 INHBEP58166 350 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
CBWD3-210ENST00000614398 GPAT2Q6NUI2 795 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 RGMBQ6NW40 437 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 CLEC17AQ6ZS10 378 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 ADGRF4Q8IZF3 695 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 CCDC148Q8NFR7 591 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 FBXO18Q8NFZ0 1043 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 SLC26A6Q9BXS9 759 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 RPAP3Q9H6T3 665 aaPredicted RBP7.21□□□□□ -1.26
CBWD3-210ENST00000614398 SLC38A10Q9HBR0 1119 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 BARHL2Q9NY43 387 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 PRR12Q9ULL5 1215 aa7.21□□□□□ -1.26
CBWD3-210ENST00000614398 NAP1L2Q9ULW6 460 aaPredicted RBP7.21□□□□□ -1.26
CBWD3-210ENST00000614398 MORC2Q9Y6X9 1032 aaPredicted RBP7.21□□□□□ -1.26
CBWD3-210ENST00000614398 WDR33Q9C0J8 1336 aaKnown RBP7.21□□□□□ -1.26
CBWD3-210ENST00000614398 TMEM232C9JQI7 657 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 STXBP3O00186 592 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 TPM2P07951 284 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 XBP1P17861 261 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 CALML3P27482 149 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 HMGCS2P54868 508 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 FMR1Q06787 632 aaKnown RBP eCLIP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 FAM184AQ8NB25 1140 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 OTUD5Q96G74 571 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms