RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 REPS2Q8NFH8 660 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 TRIM43Q96BQ3 446 aaPredicted RBP15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 TEX13BQ9BXU2 312 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 CLIP2Q9UDT6 1046 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 ADAMTS5Q9UNA0 930 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 PHF24Q9UPV7 400 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 A0A1W2PQ45 241 aaPredicted RBP15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 A0A1W2PQY0 241 aa15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 M0R2C6 588 aa15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 CLTBP09497 229 aa15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 RAVER2Q9HCJ3 691 aaKnown RBP15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 EPB41L4AQ9HCS5 686 aaPredicted RBP15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 NRBP1Q9UHY1 535 aa15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 RIPK3Q9Y572 518 aa15.95■□□□□ 0.14
HMGB1P24-201ENST00000611897 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 RNF113AO15541 343 aaKnown RBP15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 RAG1P15918 1043 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 SBK1Q52WX2 424 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 RNPC3Q96LT9 517 aaKnown RBP15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 HOMER2Q9NSB8 354 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 NYAP2Q9P242 653 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 ROBO3Q96MS0 1386 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
HMGB1P24-201ENST00000611897 ZBED4O75132 1171 aa15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 ZNF865P0CJ78 1059 aaPredicted RBP15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 IKQ13123 557 aaPredicted RBP15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 FAM109BQ6ICB4 259 aaPredicted RBP15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 PRPF38AQ8NAV1 312 aaKnown RBP15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 CEP95Q96GE4 821 aa15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 STARD7Q9NQZ5 370 aa15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 TACC3Q9Y6A5 838 aa15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 EYSQ5T1H1 3165 aa15.93■□□□□ 0.14
HMGB1P24-201ENST00000611897 ITGB8P26012 769 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 ANKRD35Q8N283 1001 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 VTI1AQ96AJ9 217 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 SEC62Q99442 399 aaKnown RBP15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 ZNF287Q9HBT7 754 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 TMEM39AQ9NV64 488 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
HMGB1P24-201ENST00000611897 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 ADAMTS4O75173 837 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 ZFYP08048 801 aaPredicted RBP15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 C6orf222P0C671 652 aaPredicted RBP15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 TSPY3P0CV98 308 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 TSPY8P0CW00 308 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 GNAT2P19087 354 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 ACLYP53396 1101 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 MYLIPQ8WY64 445 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 CDX2Q99626 313 aaPredicted RBP15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 MTMR7Q9Y216 660 aa15.91■□□□□ 0.14
HMGB1P24-201ENST00000611897 PRUNE2Q8WUY3 3088 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 SNAI1O95863 264 aaPredicted RBP15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 TTLL1O95922 423 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 EPHB4P54760 987 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 FPGSQ05932 587 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 KCNA10Q16322 511 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 LRRFIP1Q32MZ4 808 aaKnown RBP15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 C1orf53Q5VUE5 145 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 SLFN13Q68D06 897 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 NUP133Q8WUM0 1156 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 NACAP1Q9BZK3 213 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 NAPBQ9H115 298 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 DCTPP1Q9H773 170 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 MTMR4Q9NYA4 1195 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 FEM1BQ9UK73 627 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 SYNGAP1Q96PV0 1343 aa15.9■□□□□ 0.14
HMGB1P24-201ENST00000611897 MYO9BQ13459 2157 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 IGKV6D-41A0A0C4DH26 115 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 DCDC2CA8MYV0 355 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 BMP3P12645 472 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 ARMCX2Q7L311 632 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 IFNL3Q8IZI9 196 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 MAFAQ8NHW3 353 aaPredicted RBP15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 OTUD7AQ8TE49 926 aaPredicted RBP15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 SEMA6BQ9H3T3 888 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 SPC25Q9HBM1 224 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 SLC38A10Q9HBR0 1119 aa15.89■□□□□ 0.13
HMGB1P24-201ENST00000611897 DNAJC25-GNG10A0A024R161 153 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 PATL2C9JE40 543 aaKnown RBP15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 TMEM232C9JQI7 657 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 ADCY6O43306 1168 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 SLC3A2P08195 630 aaKnown RBP15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 FOSL2P15408 326 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 TFAP4Q01664 338 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 PDE4BQ07343 736 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 ACVR2BQ13705 512 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 CCDC144BQ3MJ40 725 aa15.88■□□□□ 0.13
HMGB1P24-201ENST00000611897 MSL3Q8N5Y2 521 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms