RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 SETQ01105 290 aaPredicted RBP9.71□□□□□ -0.86
LIG4-204ENST00000611712 MFSD14BQ5SR56 506 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 CLEC4GQ6UXB4 293 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 NBPF11Q86T75 865 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 CUL5Q93034 780 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 PARD6BQ9BYG5 372 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 DCP1AQ9NPI6 582 aaPredicted RBP9.71□□□□□ -0.86
LIG4-204ENST00000611712 HPSEQ9Y251 543 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 TOM1O60784 492 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 MFAP3LO75121 409 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 PNMA6AP0CW24 399 aaPredicted RBP9.71□□□□□ -0.86
LIG4-204ENST00000611712 KCNJ6P48051 423 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 ADCY7P51828 1080 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 MAPK8IP2Q13387 824 aaPredicted RBP9.71□□□□□ -0.86
LIG4-204ENST00000611712 NTRK3Q16288 839 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 WHAMMP3Q1A5X7 153 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 ODF2Q5BJF6 829 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 NEK8Q86SG6 692 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
LIG4-204ENST00000611712 MAP3K14Q99558 947 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 EPC1Q9H2F5 836 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 RWDD2AQ9UIY3 292 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 MYO6Q9UM54 1294 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 SAR1BQ9Y6B6 198 aa9.71□□□□□ -0.86
LIG4-204ENST00000611712 MTF1Q14872 753 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 NCAPHQ15003 741 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 GALNT17Q6IS24 598 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 WDR24Q96S15 920 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 PSMB7Q99436 277 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 TUBGCP2Q9BSJ2 902 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 HAUS4Q9H6D7 363 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 SETD1AO15047 1707 aaKnown RBP9.7□□□□□ -0.86
LIG4-204ENST00000611712 B4DLN1 442 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 BTDP43251 543 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 SECISBP2LQ93073 1101 aaKnown RBP9.7□□□□□ -0.86
LIG4-204ENST00000611712 TSPYL1Q9H0U9 437 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 SLC39A2Q9NP94 309 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 ENC1O14682 589 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 TYW1BQ6NUM6 668 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 TSGA10Q9BZW7 698 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 TMOD2Q9NZR1 351 aa9.7□□□□□ -0.86
LIG4-204ENST00000611712 FRMPD2Q68DX3 1309 aaPredicted RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 TBCAO75347 108 aaKnown RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 ERLIN2O94905 339 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 PFKFB3Q16875 520 aaPredicted RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 LONRF2Q1L5Z9 754 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 CERS3Q8IU89 383 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 ZNF622Q969S3 477 aaKnown RBP eCLIP9.69□□□□□ -0.86
LIG4-204ENST00000611712 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 TBC1D7Q9P0N9 293 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 JCADQ9P266 1359 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 XRN1Q8IZH2 1706 aaKnown RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 KCNQ2O43526 872 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 KIAA0754O94854 1291 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 CAMTA2O94983 1202 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 MAGEA1P43355 309 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 TCP11X2Q5H9J9 407 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 DGKHQ86XP1 1220 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 SRBD1Q8N5C6 995 aaKnown RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 RSPH14Q9UHP6 348 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 RGPD1P0DJD0 1748 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 SHTN1A0MZ66 631 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 FGFR2P21802 821 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 RRAGAQ7L523 313 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 TRMT1LQ7Z2T5 733 aaKnown RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 CCDC84Q86UT8 332 aaPredicted RBP9.69□□□□□ -0.86
LIG4-204ENST00000611712 CCDC65Q8IXS2 484 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 DISC1Q9NRI5 854 aa9.69□□□□□ -0.86
LIG4-204ENST00000611712 TOPAZ1Q8N9V7 1692 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 EEF1GP26641 437 aaKnown RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 GTF2IP78347 998 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 RAPGEF1Q13905 1077 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 TERF2Q15554 542 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 HERC4Q5GLZ8 1057 aaPredicted RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 FAM182BQ5T319 152 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 LRRC47Q8N1G4 583 aaKnown RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 PHF20Q9BVI0 1012 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 IFIH1Q9BYX4 1025 aaKnown RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 ADGRG1Q9Y653 693 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 TCRBV5S4A2TA0A5A2 114 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 FOXP4Q8IVH2 680 aaPredicted RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 NELFCDQ8IXH7 590 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 CNOT6LQ96LI5 555 aaKnown RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 NLRC4Q9NPP4 1024 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 LTN1O94822 1766 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 TRIM49BA6NDI0 452 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 UBAP1LF5GYI3 381 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms