RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 VCPKMTQ9H867 229 aa25.64■■□□□ 1.7
UBE3C-209ENST00000611269 PALM3A6NDB9 673 aaPredicted RBP25.64■■□□□ 1.69
UBE3C-209ENST00000611269 GOLGA6L4A6NEF3 574 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 USP17L10C9JJH3 530 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 SLC1A4P43007 532 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 GUCY1B3Q02153 619 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 TMTC3Q6ZXV5 915 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 CCDC82Q8N4S0 544 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 KIAA1683Q9H0B3 1180 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 AFG3L2Q9Y4W6 797 aa25.64■■□□□ 1.69
UBE3C-209ENST00000611269 TOMM70O94826 608 aa25.63■■□□□ 1.69
UBE3C-209ENST00000611269 ZNF543Q08ER8 600 aa25.63■■□□□ 1.69
UBE3C-209ENST00000611269 CCDC96Q2M329 555 aa25.63■■□□□ 1.69
UBE3C-209ENST00000611269 DCAF4Q8WV16 495 aa25.63■■□□□ 1.69
UBE3C-209ENST00000611269 MYH15Q9Y2K3 1946 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 DGKZQ13574 1117 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 ASPRV1Q53RT3 343 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 KCTD1Q719H9 257 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 ERO1BQ86YB8 467 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 PHKBQ93100 1093 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 GMCL1Q96IK5 515 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 NUP88Q99567 741 aaPredicted RBP25.62■■□□□ 1.69
UBE3C-209ENST00000611269 STK36Q9NRP7 1315 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 BACE1P56817 501 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 SRBD1Q8N5C6 995 aaKnown RBP25.62■■□□□ 1.69
UBE3C-209ENST00000611269 RBM46Q8TBY0 533 aaKnown RBP25.62■■□□□ 1.69
UBE3C-209ENST00000611269 OTUD5Q96G74 571 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 PGBD1Q96JS3 809 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 GPCPD1Q9NPB8 672 aa25.62■■□□□ 1.69
UBE3C-209ENST00000611269 BAZ2BQ9UIF8 2168 aaKnown RBP25.62■■□□□ 1.69
UBE3C-209ENST00000611269 SPDYE5A6NIY4 337 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 UNCXA6NJT0 531 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 KLRF2D3W0D1 207 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 IFNAR1P17181 557 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 PPATQ06203 517 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 BRAPQ7Z569 592 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 NBPF11Q86T75 865 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 ANP32BQ92688 251 aaKnown RBP25.61■■□□□ 1.69
UBE3C-209ENST00000611269 CPVLQ9H3G5 476 aa25.61■■□□□ 1.69
UBE3C-209ENST00000611269 GNAQP50148 359 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 FUT2Q10981 343 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 TPRNQ4KMQ1 711 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 ALG1Q9BT22 464 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 PTPRFP10586 1907 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 USP14P54578 494 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 GPATCH4Q5T3I0 446 aaKnown RBP25.6■■□□□ 1.69
UBE3C-209ENST00000611269 OTUD7BQ6GQQ9 843 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 OPTNQ96CV9 577 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 SLC10A4Q96EP9 437 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 USP28Q96RU2 1077 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 PPP1R9BQ96SB3 815 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 EMILIN3Q9NT22 766 aa25.6■■□□□ 1.69
UBE3C-209ENST00000611269 BMP3P12645 472 aa25.59■■□□□ 1.69
UBE3C-209ENST00000611269 LIG1P18858 919 aa25.59■■□□□ 1.69
UBE3C-209ENST00000611269 SLC35G1Q2M3R5 365 aa25.59■■□□□ 1.69
UBE3C-209ENST00000611269 TTBK2Q6IQ55 1244 aa25.59■■□□□ 1.69
UBE3C-209ENST00000611269 SLC26A6Q9BXS9 759 aa25.59■■□□□ 1.69
UBE3C-209ENST00000611269 RTEL1Q9NZ71 1219 aa25.59■■□□□ 1.69
UBE3C-209ENST00000611269 IRF6O14896 467 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 FMNL1O95466 1100 aaPredicted RBP25.58■■□□□ 1.69
UBE3C-209ENST00000611269 HMGCS2P54868 508 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 SSRP1Q08945 709 aaKnown RBP25.58■■□□□ 1.69
UBE3C-209ENST00000611269 CCDC173Q0VFZ6 552 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 FAM83BQ5T0W9 1011 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 LPAR1Q92633 364 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 LZTS2Q9BRK4 669 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 UBA5Q9GZZ9 404 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 CNTNAP5Q8WYK1 1306 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 MYH6P13533 1939 aa25.58■■□□□ 1.69
UBE3C-209ENST00000611269 C19orf81C9J6K1 198 aa25.57■■□□□ 1.68
UBE3C-209ENST00000611269 CYTH3O43739 400 aa25.57■■□□□ 1.68
UBE3C-209ENST00000611269 KIF23Q02241 960 aaPredicted RBP25.57■■□□□ 1.68
UBE3C-209ENST00000611269 PPIL2Q13356 520 aa25.57■■□□□ 1.68
UBE3C-209ENST00000611269 WASF1Q92558 559 aa25.57■■□□□ 1.68
UBE3C-209ENST00000611269 DDX19AQ9NUU7 478 aaKnown RBP25.57■■□□□ 1.68
UBE3C-209ENST00000611269 VCAM1P19320 739 aa25.56■■□□□ 1.68
UBE3C-209ENST00000611269 SLC16A2P36021 539 aa25.56■■□□□ 1.68
UBE3C-209ENST00000611269 HUNKP57058 714 aa25.56■■□□□ 1.68
UBE3C-209ENST00000611269 TRIM22Q8IYM9 498 aa25.56■■□□□ 1.68
UBE3C-209ENST00000611269 FUCA2Q9BTY2 467 aa25.56■■□□□ 1.68
UBE3C-209ENST00000611269 hCG_1642624A0A1W2PR95 340 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 TMEM232C9JQI7 657 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 GJA5P36382 358 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 SPZ1Q9BXG8 430 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 RNF26Q9BY78 433 aaPredicted RBP25.55■■□□□ 1.68
UBE3C-209ENST00000611269 GJB4Q9NTQ9 266 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 WDR46O15213 610 aaKnown RBP25.55■■□□□ 1.68
UBE3C-209ENST00000611269 CEBPZQ03701 1054 aaKnown RBP25.55■■□□□ 1.68
UBE3C-209ENST00000611269 KRT40Q6A162 431 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 PIBF1Q8WXW3 757 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 C12orf42Q96LP6 360 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 AIFM3Q96NN9 605 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 NUP62CLQ9H1M0 184 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 DACT1Q9NYF0 836 aa25.55■■□□□ 1.68
UBE3C-209ENST00000611269 V9GY48 417 aaPredicted RBP25.55■■□□□ 1.68
UBE3C-209ENST00000611269 SH3D19Q5HYK7 790 aa25.54■■□□□ 1.68
UBE3C-209ENST00000611269 MYSM1Q5VVJ2 828 aa25.54■■□□□ 1.68
UBE3C-209ENST00000611269 BICD2Q8TD16 824 aa25.54■■□□□ 1.68
UBE3C-209ENST00000611269 FTOQ9C0B1 505 aaKnown RBP eCLIP25.54■■□□□ 1.68
UBE3C-209ENST00000611269 VAT1LQ9HCJ6 419 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms