RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ZSWIM5Q9P217 1185 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 ZNF215Q9UL58 517 aaPredicted RBP15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 NR5A1Q13285 461 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 AGTPBP1Q9UPW5 1226 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 SPHKAPQ2M3C7 1700 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 RASGRF1Q13972 1273 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 ERCC6LQ2NKX8 1250 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 SLFN13Q68D06 897 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 TSKSQ9UJT2 592 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 AXIN2Q9Y2T1 843 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 RESTQ13127 1097 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 DAAM2Q86T65 1068 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 FBXO11Q86XK2 927 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 GINS2Q9Y248 185 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 SOS2Q07890 1332 aaPredicted RBP15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 IFNAR1P17181 557 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 CYP2J2P51589 502 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 MXRA7P84157 204 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 ZNF365Q70YC5 407 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 MAK16Q9BXY0 300 aaKnown RBP15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 NCAPD2Q15021 1401 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 FAM170AA1A519 330 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 GOLGA6CA6NDK9 693 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 TCP10L2B9ZVM9 353 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 GOLGA6DP0CG33 693 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 ERCC5P28715 1186 aaPredicted RBP15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 LRRC45Q96CN5 670 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 HOOK2Q96ED9 719 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 GSDMAQ96QA5 445 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 GPHNQ9NQX3 736 aaPredicted RBP15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 PANK4Q9NVE7 773 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 GOLGA6AQ9NYA3 693 aa15.77■□□□□ 0.12
PCDHB16-201ENST00000609684 TRAPPC10P48553 1259 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM196AQ6ZSG2 479 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 AIFM3Q96NN9 605 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 SAMD15Q9P1V8 674 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 PCDHA1Q9Y5I3 950 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 ALKQ9UM73 1620 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 GOLGA6BA6NDN3 693 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 COBLO75128 1261 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 MMP1P03956 469 aa15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 SND1Q7KZF4 910 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM26FQ5R3K3 315 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM182BQ5T319 152 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 NLRX1Q86UT6 975 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 SLFN12Q8IYM2 578 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 GPR161Q8N6U8 529 aaKnown RBP15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 FERP16591 822 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 MCTP2Q6DN12 878 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 SYCE1Q8N0S2 351 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 CYP2D7A0A087X1C5 515 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 PAK2Q13177 524 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 SUSD4Q5VX71 490 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 GDAP1L1Q96MZ0 367 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 AZI2Q9H6S1 392 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 TXNDC16Q9P2K2 825 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 PCDHA4Q9UN74 947 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 ALAS1P13196 640 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 TRIM58Q8NG06 486 aa15.76■□□□□ 0.11
PCDHB16-201ENST00000609684 STAT1P42224 750 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 MCAMP43121 646 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 COPB1P53618 953 aaKnown RBP15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 GRAMD1CQ8IYS0 662 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 U2AF1L4Q8WU68 220 aaKnown RBP15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 NKIRAS1Q9NYS0 192 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 TESPA1A2RU30 521 aaPredicted RBP15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 CCDC6Q16204 474 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 SMYD4Q8IYR2 804 aaPredicted RBP15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 MYO1AQ9UBC5 1043 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 ASIC3Q9UHC3 531 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 POLR2MP0CAP2 368 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 HLFQ16534 295 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 WHAMMP3Q1A5X7 153 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 FLAD1Q8NFF5 587 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 PLEKHA4Q9H4M7 779 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 NLGN1Q8N2Q7 840 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 UBE2Q2Q8WVN8 375 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 USTQ9Y2C2 406 aa15.75■□□□□ 0.11
PCDHB16-201ENST00000609684 CYP4A11Q02928 519 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 SMAP1Q8IYB5 467 aaPredicted RBP15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 MRPL11Q9Y3B7 192 aaKnown RBP15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 LRRC7Q96NW7 1537 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 NDUFAB1O14561 156 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 IKBKBO14920 756 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 OAS2P29728 719 aaKnown RBP15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 LIFRP42702 1097 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 TTC16Q8NEE8 873 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms