RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 PCDHA8Q9Y5H6 950 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
LINC01278-204ENST00000609143 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
LINC01278-204ENST00000609143 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 RAD17O75943 681 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
LINC01278-204ENST00000609143 TGFB2P61812 414 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
LINC01278-204ENST00000609143 ARL6IP4Q66PJ3 421 aaKnown RBP13.04□□□□□ -0.32
LINC01278-204ENST00000609143 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
LINC01278-204ENST00000609143 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 PIM2Q9P1W9 311 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
LINC01278-204ENST00000609143 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 VWA3AA6NCI4 1184 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 PSMD14O00487 310 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
LINC01278-204ENST00000609143 TPM3P06753 285 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 POLD1P28340 1107 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 POSTNQ15063 836 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 TATDN1Q6P1N9 297 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
LINC01278-204ENST00000609143 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 PDILTQ8N807 584 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 FAM196BA6NMK8 535 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 ZNF75DP51815 510 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 USP49Q70CQ1 688 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
LINC01278-204ENST00000609143 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
LINC01278-204ENST00000609143 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 TPM4P67936 248 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 EPSTI1Q96J88 318 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 PYM1Q9BRP8 204 aaKnown RBP13.03□□□□□ -0.32
LINC01278-204ENST00000609143 ZNRF3Q9ULT6 936 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 PCDHA5Q9Y5H7 936 aa13.03□□□□□ -0.32
LINC01278-204ENST00000609143 SMTNL1A8MU46 457 aa13.02□□□□□ -0.32
LINC01278-204ENST00000609143 SLURP2P0DP57 97 aa13.02□□□□□ -0.32
LINC01278-204ENST00000609143 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.32
LINC01278-204ENST00000609143 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.32
LINC01278-204ENST00000609143 INF2Q27J81 1249 aa13.02□□□□□ -0.32
LINC01278-204ENST00000609143 MKL1Q969V6 931 aa13.02□□□□□ -0.32
LINC01278-204ENST00000609143 GMLQ99445 158 aa13.02□□□□□ -0.32
LINC01278-204ENST00000609143 ABCB5Q2M3G0 1257 aa13.02□□□□□ -0.33
LINC01278-204ENST00000609143 PPP1R18Q6NYC8 613 aa13.02□□□□□ -0.33
LINC01278-204ENST00000609143 DHX58Q96C10 678 aa13.02□□□□□ -0.33
LINC01278-204ENST00000609143 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
LINC01278-204ENST00000609143 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC01278-204ENST00000609143 COL4A5P29400 1685 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 LAD1O00515 517 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
LINC01278-204ENST00000609143 LONP1P36776 959 aaKnown RBP13.01□□□□□ -0.33
LINC01278-204ENST00000609143 ICA1Q05084 483 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
LINC01278-204ENST00000609143 SPC24Q8NBT2 197 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
LINC01278-204ENST00000609143 PNMA6FA0A0J9YX94 578 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 FOXN1O15353 648 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 SLFN14P0C7P3 912 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 TXLNAP40222 546 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
LINC01278-204ENST00000609143 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 JMJD4Q9H9V9 463 aa13.01□□□□□ -0.33
LINC01278-204ENST00000609143 HERC5Q9UII4 1024 aaKnown RBP13.01□□□□□ -0.33
LINC01278-204ENST00000609143 IKBKBO14920 756 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 SMC2O95347 1197 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 CDC25BP30305 580 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 ADCY7P51828 1080 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 SEPT2Q15019 361 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
LINC01278-204ENST00000609143 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
LINC01278-204ENST00000609143 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
LINC01278-204ENST00000609143 SLFN13Q68D06 897 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms