RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 FAM207AQ9NSI2 230 aaPredicted RBP15.9■□□□□ 0.14
LINC02538-201ENST00000609107 SAMSN1Q9NSI8 373 aaKnown RBP15.9■□□□□ 0.14
LINC02538-201ENST00000609107 TAF6LQ9Y6J9 622 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 ARID5BQ14865 1188 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 ARL6IP4Q66PJ3 421 aaKnown RBP15.9■□□□□ 0.14
LINC02538-201ENST00000609107 NCAPH2Q6IBW4 605 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 MYOCDQ8IZQ8 938 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 BICD1Q96G01 975 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 PAGE5Q96GU1 130 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
LINC02538-201ENST00000609107 MYO1AQ9UBC5 1043 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 USP21Q9UK80 565 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 ANKRD26Q9UPS8 1709 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 TMTC3Q6ZXV5 915 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 RWDD2AQ9UIY3 292 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 CPDO75976 1380 aa15.9■□□□□ 0.14
LINC02538-201ENST00000609107 CYP2D7A0A087X1C5 515 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 OAS2P29728 719 aaKnown RBP15.89■□□□□ 0.13
LINC02538-201ENST00000609107 MECOMQ03112 1051 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 CCDC144BQ3MJ40 725 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
LINC02538-201ENST00000609107 SFMBT2Q5VUG0 894 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 CCDC155Q8N6L0 562 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 TRIM58Q8NG06 486 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 VEZTQ9HBM0 779 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 MAP2K1Q02750 393 aaPredicted RBP15.89■□□□□ 0.13
LINC02538-201ENST00000609107 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 DGKHQ86XP1 1220 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 C2CD5Q86YS7 1000 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 UBN2Q6ZU65 1347 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 PNPLA7Q6ZV29 1317 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 GSG1L2A8MUP6 293 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 CHGBP05060 677 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 RBL2Q08999 1139 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 DHX40Q8IX18 779 aaKnown RBP15.89■□□□□ 0.13
LINC02538-201ENST00000609107 GOLGA8FQ08AF8 430 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 GOLGA8DPQ0D2H9 430 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 SMC1AQ14683 1233 aaKnown RBP15.89■□□□□ 0.13
LINC02538-201ENST00000609107 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 PANX2Q96RD6 677 aa15.89■□□□□ 0.13
LINC02538-201ENST00000609107 ATP8B1O43520 1251 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 SMYD4Q8IYR2 804 aaPredicted RBP15.88■□□□□ 0.13
LINC02538-201ENST00000609107 KLHL30Q0D2K2 578 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 AFAP1L1Q8TED9 768 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 hCG_1984214I3L0E3 225 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 SNAP23O00161 211 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 IQCB1Q15051 598 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 NELFCDQ8IXH7 590 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 ZNF713Q8N859 430 aaPredicted RBP15.88■□□□□ 0.13
LINC02538-201ENST00000609107 PSTPIP2Q9H939 334 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
LINC02538-201ENST00000609107 KIF28PB7ZC32 967 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 PLEKHA8P1O95397 391 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 SRGAP1Q7Z6B7 1085 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 IFT20Q8IY31 132 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 INCENPQ9NQS7 918 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 ASPRV1Q53RT3 343 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 RASGRP4Q8TDF6 673 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC02538-201ENST00000609107 FRMPD2Q68DX3 1309 aaPredicted RBP15.87■□□□□ 0.13
LINC02538-201ENST00000609107 EBAG9O00559 213 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 TBC1D7Q9P0N9 293 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
LINC02538-201ENST00000609107 LRRC47Q8N1G4 583 aaKnown RBP15.87■□□□□ 0.13
LINC02538-201ENST00000609107 CCDC26Q8TAB7 109 aa15.87■□□□□ 0.13
LINC02538-201ENST00000609107 CFAP221Q4G0U5 840 aa15.86■□□□□ 0.13
LINC02538-201ENST00000609107 CNOT6LQ96LI5 555 aaKnown RBP15.86■□□□□ 0.13
LINC02538-201ENST00000609107 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
LINC02538-201ENST00000609107 SHC4Q6S5L8 630 aa15.86■□□□□ 0.13
LINC02538-201ENST00000609107 DDX12PQ92771 950 aa15.86■□□□□ 0.13
LINC02538-201ENST00000609107 P2RX5Q93086 422 aa15.86■□□□□ 0.13
LINC02538-201ENST00000609107 NAP1L3Q99457 506 aaPredicted RBP15.86■□□□□ 0.13
LINC02538-201ENST00000609107 FLOT1O75955 427 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 GPBP1Q86WP2 473 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 ENAHQ8N8S7 591 aaPredicted RBP15.85■□□□□ 0.13
LINC02538-201ENST00000609107 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 NLRC4Q9NPP4 1024 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 MINPP1Q9UNW1 487 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 PTPN21Q16825 1174 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 DDX25Q9UHL0 483 aaKnown RBP15.85■□□□□ 0.13
LINC02538-201ENST00000609107 NKX1-1Q15270 411 aaPredicted RBP15.85■□□□□ 0.13
LINC02538-201ENST00000609107 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
LINC02538-201ENST00000609107 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 SLC35F6Q8N357 371 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 ATRIPQ8WXE1 791 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.85■□□□□ 0.13
LINC02538-201ENST00000609107 A6NNZ2 444 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 CHMP2AO43633 222 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 CTDNEP1O95476 244 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 TNFAIP3P21580 790 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 TUBB8Q3ZCM7 444 aa15.85■□□□□ 0.13
LINC02538-201ENST00000609107 FAM26FQ5R3K3 315 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms